| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_1896 |
|---|
| Symbol | |
|---|
| ID | 8333239 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | + |
|---|
| Start bp | 2151639 |
|---|
| End bp | 2152814 |
|---|
| Gene Length | 1176 bp |
|---|
| Protein Length | 391 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 644955045 |
|---|
| Product | histidine kinase dimerisation and phosphoacceptor region |
|---|
| Protein accession | YP_003112657 |
|---|
| Protein GI | 256391093 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG4585] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACACCGG TGATCCACGG CGACTGGTCG GACAGCGACG CCGACATCCC CGCCCTGGCC
CGGATGCGGC GGTACACGAC GGGGACCGTG GTCGTTCTCG TTGCGGGGTA CGTGCTCCTG
GTCGCCGGGG GGAGCCGCTC GCTGTGGAGT CTGGTCGCCA CGCTCGGCAT CGGGGCGCTG
GTCTGCTGGC AGTGCTTGTA CTGGGAGCGA GGGGCGCCGA AAGCCCTCGC CGCGGTGACC
GTCAGCGCTT CCTACGTCCT GCTGTGGCTC ATCCTCGGGA CCCACGGCAG CCCGATCGGC
GGCGTCGGCT TCGCCCTGTC GGCCGGACTC GTGGTGACCA CGCCGCCGTT CACGAAGTGG
CCGTGGACCG CCCTGGCCAT CGGCCTCGGG GTATTGCCCG CGCTGGTCTT CGGGGCGGAA
CGCGGCAATG TCATCGGCGC GGGCGTCATG ATGGCGAGCT CCGTGGCGCT GTTCCGCGTC
AACCGCTTCG GGTTCGGGCT CTTCCTGGAC GTCGACCAAG CGCGGCGCGC GACGGCCGAA
CTCGCCGTCA TGCGCGAGCG TTACCGCTTC GCCGCCGATC TGCACGACAT CCAGGGGCAG
GCGCTGCATG TCAGCCGTCT GAAGCTCCGG CTGGCGGACA AGCTGCTCGC CGAGGACCCG
GCCGTCGCCA GAACGCATCT GCGCGAAGCC GAGCAGCTCA TCGCGGACGC GATCGCCGAG
ACCCGGCGGC TGGCCTACGG GCAGCGGACG CTGACGTTCG CCGGGGAGTT GGCCAACTCC
GAGTCGCTCA TCCGGGCGGC CGGGATCTCG TTCGAGGTCG CCGGCGCGGC GCCGGTCGGC
CACCGGCTGG ATGAGCTGTT CGGCCTCGTG GTGCGTGAGG CGACCACCAA CCTGCTGCGC
CACGCTCAAG CCGAGCACGT CGCCATCACA CTGCGGCCGG ACTCGGTGCG CATCGTCAAC
GACGGCGCGG AGGAGGCGAC ACGCACGCTG AGCGGTCTGG CGCGCCTGGG GGAGCGGTTC
GCCGCAGCCG GCGGCGTGCT GGTGACGTCG CAGGAGGGGC GGACGTTCAC GACGTGGGCG
CGGGATGCGG CGAGTGATGC GGCGCCTGAC GCGTCTGCCG CGCCTAATGC ATCTGAAGCG
CCGAAGGTGT CCAACCCACG AGGCCCACGC GCATGA
|
|---|
| Protein sequence | MTPVIHGDWS DSDADIPALA RMRRYTTGTV VVLVAGYVLL VAGGSRSLWS LVATLGIGAL
VCWQCLYWER GAPKALAAVT VSASYVLLWL ILGTHGSPIG GVGFALSAGL VVTTPPFTKW
PWTALAIGLG VLPALVFGAE RGNVIGAGVM MASSVALFRV NRFGFGLFLD VDQARRATAE
LAVMRERYRF AADLHDIQGQ ALHVSRLKLR LADKLLAEDP AVARTHLREA EQLIADAIAE
TRRLAYGQRT LTFAGELANS ESLIRAAGIS FEVAGAAPVG HRLDELFGLV VREATTNLLR
HAQAEHVAIT LRPDSVRIVN DGAEEATRTL SGLARLGERF AAAGGVLVTS QEGRTFTTWA
RDAASDAAPD ASAAPNASEA PKVSNPRGPR A
|
|---|
| |