Gene Caci_1889 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_1889 
Symbol 
ID8333232 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp2142616 
End bp2143824 
Gene Length1209 bp 
Protein Length402 aa 
Translation table11 
GC content71% 
IMG OID644955038 
Productsodium/hydrogen exchanger 
Protein accessionYP_003112650 
Protein GI256391086 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0475] Kef-type K+ transport systems, membrane components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCACGC ACTCCCTGTC GACGCTGCTG CTGGTGGCCG TGATCGCCGT GCTGGCGCCG 
CCGCTGGCCG ATCTGGCGGG CCGCAAGGCG CCGGTGCCGC TGGTCGTGTT CGAGATCGTG
CTCGGCATCC TGGTCGGCCC GGACGTACTC GGCTGGGCCC ACGACGACGA CTACGTGCAC
GCGCTGTCCC AGTTCGGTCT GGCGATGCTG TTCTTCATGG CCGGCTACGA GATCGACTTC
GCCCGGCTGC GCGGCGGCCC GCTGTCCCGC GCGCTGCTGG GCTGGGTGAT GTCGGTGGTG
ATCGGCGTCG GGATCGGGCT GGTCCTGGCG CCCTCGGCCA AGAGCGGCGT CATCGTCGGC
ATCGCGTTGA GCACCACCGC GCTCGGCACG ATCCTGCCGG TGCTGCGCGA CGCCGGCGAG
ATCGGCACGC CGCTGGGGAC CGTGGTGACG GCGGTCGGCG CGGTCGGGGA GTTCGCGCCG
ATCATCGCCA TGACGCTGTT CCTGGACGGC CGCAGGCCCG GCCAGGCGAT AGTCTACCTG
ACGGCGTTCG CGCTGATCGC CGGCGTCGGG ATCGTCGTGG CGGTGCGCGG CGAGCACACG
GCGGTGAACC GGCTGGCCGA CGTCACCATG GAGACCTCCG GGCAGTTCGC CGTCCGGCTG
GTCATCGCGC TGTTGATCGC GATGATCGGG GCGACCGTCG CCCTCGGCGT GGACATGCTG
CTCGGCGCGT TCGCCGCCGG GGTGATCATG CGGATCCTGT TCCACAGCGG CGACCCGGAA
CGCGCCGAGC GGGTCACCGC GAAGCTGGAG GCGATCGGGT TCGGCTTCCT GATCCCGGTG
TTCTTCATCG ACACCGGGAT CGGCTACGAT CTCAAGGCCC TGACCTCGAA CTGGGCCACG
CTCGGCCTGG TGCCGCTGTT CCTGGCGCTG TTCCTGCTCA CCCGCGGACT GCCCAGCTTC
CTGACCGCGC CGGAGGGCAC GAGCACCCGC GCCCGGCGTG CGATCGCGCT CTACGCGGCG
ACCGGTCTGC CGCTGATCGT CGCCATCACC GCGATCGGCG TGGAGCGCGG CACGCTGAAG
TCCTCCAGCG CCGCGGCGAT GGTCGGCGCC GGGATGCTGT CGGTGCTGCT CTATCCGTTC
CTGGCGCTGA AGGTGAGCGG AGACAGGCGG ACCCCGCAAG GTCCGCGCGA AGCCGCCGAG
AGCTGGTGA
 
Protein sequence
MSTHSLSTLL LVAVIAVLAP PLADLAGRKA PVPLVVFEIV LGILVGPDVL GWAHDDDYVH 
ALSQFGLAML FFMAGYEIDF ARLRGGPLSR ALLGWVMSVV IGVGIGLVLA PSAKSGVIVG
IALSTTALGT ILPVLRDAGE IGTPLGTVVT AVGAVGEFAP IIAMTLFLDG RRPGQAIVYL
TAFALIAGVG IVVAVRGEHT AVNRLADVTM ETSGQFAVRL VIALLIAMIG ATVALGVDML
LGAFAAGVIM RILFHSGDPE RAERVTAKLE AIGFGFLIPV FFIDTGIGYD LKALTSNWAT
LGLVPLFLAL FLLTRGLPSF LTAPEGTSTR ARRAIALYAA TGLPLIVAIT AIGVERGTLK
SSSAAAMVGA GMLSVLLYPF LALKVSGDRR TPQGPREAAE SW