Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_1889 |
Symbol | |
ID | 8333232 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 2142616 |
End bp | 2143824 |
Gene Length | 1209 bp |
Protein Length | 402 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 644955038 |
Product | sodium/hydrogen exchanger |
Protein accession | YP_003112650 |
Protein GI | 256391086 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0475] Kef-type K+ transport systems, membrane components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGCACGC ACTCCCTGTC GACGCTGCTG CTGGTGGCCG TGATCGCCGT GCTGGCGCCG CCGCTGGCCG ATCTGGCGGG CCGCAAGGCG CCGGTGCCGC TGGTCGTGTT CGAGATCGTG CTCGGCATCC TGGTCGGCCC GGACGTACTC GGCTGGGCCC ACGACGACGA CTACGTGCAC GCGCTGTCCC AGTTCGGTCT GGCGATGCTG TTCTTCATGG CCGGCTACGA GATCGACTTC GCCCGGCTGC GCGGCGGCCC GCTGTCCCGC GCGCTGCTGG GCTGGGTGAT GTCGGTGGTG ATCGGCGTCG GGATCGGGCT GGTCCTGGCG CCCTCGGCCA AGAGCGGCGT CATCGTCGGC ATCGCGTTGA GCACCACCGC GCTCGGCACG ATCCTGCCGG TGCTGCGCGA CGCCGGCGAG ATCGGCACGC CGCTGGGGAC CGTGGTGACG GCGGTCGGCG CGGTCGGGGA GTTCGCGCCG ATCATCGCCA TGACGCTGTT CCTGGACGGC CGCAGGCCCG GCCAGGCGAT AGTCTACCTG ACGGCGTTCG CGCTGATCGC CGGCGTCGGG ATCGTCGTGG CGGTGCGCGG CGAGCACACG GCGGTGAACC GGCTGGCCGA CGTCACCATG GAGACCTCCG GGCAGTTCGC CGTCCGGCTG GTCATCGCGC TGTTGATCGC GATGATCGGG GCGACCGTCG CCCTCGGCGT GGACATGCTG CTCGGCGCGT TCGCCGCCGG GGTGATCATG CGGATCCTGT TCCACAGCGG CGACCCGGAA CGCGCCGAGC GGGTCACCGC GAAGCTGGAG GCGATCGGGT TCGGCTTCCT GATCCCGGTG TTCTTCATCG ACACCGGGAT CGGCTACGAT CTCAAGGCCC TGACCTCGAA CTGGGCCACG CTCGGCCTGG TGCCGCTGTT CCTGGCGCTG TTCCTGCTCA CCCGCGGACT GCCCAGCTTC CTGACCGCGC CGGAGGGCAC GAGCACCCGC GCCCGGCGTG CGATCGCGCT CTACGCGGCG ACCGGTCTGC CGCTGATCGT CGCCATCACC GCGATCGGCG TGGAGCGCGG CACGCTGAAG TCCTCCAGCG CCGCGGCGAT GGTCGGCGCC GGGATGCTGT CGGTGCTGCT CTATCCGTTC CTGGCGCTGA AGGTGAGCGG AGACAGGCGG ACCCCGCAAG GTCCGCGCGA AGCCGCCGAG AGCTGGTGA
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Protein sequence | MSTHSLSTLL LVAVIAVLAP PLADLAGRKA PVPLVVFEIV LGILVGPDVL GWAHDDDYVH ALSQFGLAML FFMAGYEIDF ARLRGGPLSR ALLGWVMSVV IGVGIGLVLA PSAKSGVIVG IALSTTALGT ILPVLRDAGE IGTPLGTVVT AVGAVGEFAP IIAMTLFLDG RRPGQAIVYL TAFALIAGVG IVVAVRGEHT AVNRLADVTM ETSGQFAVRL VIALLIAMIG ATVALGVDML LGAFAAGVIM RILFHSGDPE RAERVTAKLE AIGFGFLIPV FFIDTGIGYD LKALTSNWAT LGLVPLFLAL FLLTRGLPSF LTAPEGTSTR ARRAIALYAA TGLPLIVAIT AIGVERGTLK SSSAAAMVGA GMLSVLLYPF LALKVSGDRR TPQGPREAAE SW
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