| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_1872 |
|---|
| Symbol | |
|---|
| ID | 8333215 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | + |
|---|
| Start bp | 2121792 |
|---|
| End bp | 2122310 |
|---|
| Gene Length | 519 bp |
|---|
| Protein Length | 172 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 644955021 |
|---|
| Product | (2Fe-2S)-binding domain protein |
|---|
| Protein accession | YP_003112633 |
|---|
| Protein GI | 256391069 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG2080] Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 37 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGCGAGC AGCTGCATCA GGTCACTGTC ACAGTCAACG GCGTCACCCG CCGCGGACAG
ACCCCGGCAC GGCGCCTGCT GGCCGACTTC CTGCGCATGG ACCTCGGGCT CACCGGCACG
CACCTCGGCT GCGAACACGG CGTCTGCGGC GCGTGCACCG TGCTGCTCGA CGGCGCCCCG
GTCCGCTCCT GCCTCATCTT CGCGGTCTCC ACCGACGGCC ACTCGGTGAC GACCGTCGAA
GGATGCTGCG ACCCCGACGG CGAACTGGGA CCGGTCCAGC AAGCCTTCCA GGAGTGCCAC
GGGCTGCAAT GCGGCTTCTG CACCCCCGGG TTCATCACGA CGATCGCCGC CTACCTGGAG
GAGAACCCCA AGCCCACCGA GGAGGAGGCG CGCGAGGCGA TCGGCGGCAA CCTGTGCCGC
TGCACCGGCT ACCAGAACAT CGTCGCCGCA GTACTCCGCG CTGCGGAGAT TTTGAATGAA
ACACAGCTCG AGCGGGAGCG GGAGGCGCCG CATGAGTGA
|
|---|
| Protein sequence | MSEQLHQVTV TVNGVTRRGQ TPARRLLADF LRMDLGLTGT HLGCEHGVCG ACTVLLDGAP
VRSCLIFAVS TDGHSVTTVE GCCDPDGELG PVQQAFQECH GLQCGFCTPG FITTIAAYLE
ENPKPTEEEA REAIGGNLCR CTGYQNIVAA VLRAAEILNE TQLEREREAP HE
|
|---|
| |