Gene Caci_1871 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_1871 
Symbol 
ID8333214 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp2120947 
End bp2121795 
Gene Length849 bp 
Protein Length282 aa 
Translation table11 
GC content72% 
IMG OID644955020 
Productmolybdopterin dehydrogenase FAD-binding 
Protein accessionYP_003112632 
Protein GI256391068 
COG category[C] Energy production and conversion 
COG ID[COG1319] Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCCCC CGCCGGTGGT GTATCACGGC CCGGACACGG TCGACGAGGC CGTGCGCCTG 
CTGGCCGAGC ACGGCGCCCA CGCCAAGGTC CTGGCCGGCG GCCAGAGCCT GGTGCCGATG
CTGAACATGC GGCTGACGGC GCCGTCCCGG CTGATCGACG TGAACCGCCT GGACGAGTTG
GCCTACGTCC GCACCGACCT GGAAGGCGTC CGGGTCGGCG CGCTGGCCCG GCACGCCGAC
GTCGAGCGGG CCACGCACGC CTTCGAAGCC GTCCCCCTGT TACGCCAGGC CGTGCGAACG
GTCGCGCATC CCACGATCCG CAACCGCGGA ACCACCGTCG GCAGCCTCGT GCACGCCGAT
CCCTGCGCCG AGATGCCCGC CGTCCTGGCG CTCCTCGACG GCGAGCTGTT GCTGCGCTCC
GAACGCGGCG GCGAACGGGT CGTGAAGGCG GCCGACTTCT TCGTCGGGCC CATGGAGTCG
GCCTGCCAGG AGGACGAATT GGCCGTCGAG GCCTACTTCC CGAAACCGAA GGGCCGGACG
GGCACCGACT GGCGCGAGAT GTCCCGCCGC AACGGCGACT ACGCGCTGTG CGGCGTCGGC
ACCTCGGTCC GCGTCACCGA GGCGGGCGAG GTGACCTCGG CGAAGGCGGT GTTCATCGCC
ATGGGTCCGA TGCCGCGGGT CGTGGACGTG ACCGCGGCCG GCGCCGACTG GGACGCAGCC
GCCGAAATCG CCGTCGAACA GCTGGAACCC GAGGACGACA TCCACGCGAG CGCCGAATAC
CGCAAGCATC TGGCGCGCAT CCTCACAGCG CGGTCGCTGA GGGCCTCCTA CGAGGCGGTG
GCGCCGTGA
 
Protein sequence
MKPPPVVYHG PDTVDEAVRL LAEHGAHAKV LAGGQSLVPM LNMRLTAPSR LIDVNRLDEL 
AYVRTDLEGV RVGALARHAD VERATHAFEA VPLLRQAVRT VAHPTIRNRG TTVGSLVHAD
PCAEMPAVLA LLDGELLLRS ERGGERVVKA ADFFVGPMES ACQEDELAVE AYFPKPKGRT
GTDWREMSRR NGDYALCGVG TSVRVTEAGE VTSAKAVFIA MGPMPRVVDV TAAGADWDAA
AEIAVEQLEP EDDIHASAEY RKHLARILTA RSLRASYEAV AP