Gene Caci_1869 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_1869 
Symbol 
ID8333212 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp2117439 
End bp2119268 
Gene Length1830 bp 
Protein Length609 aa 
Translation table11 
GC content73% 
IMG OID644955018 
Producttranscriptional regulator, PucR family 
Protein accessionYP_003112630 
Protein GI256391066 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism
[T] Signal transduction mechanisms 
COG ID[COG2508] Regulator of polyketide synthase expression 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGCCA AGCACGGAAG CACCGGAGAA ACGACGATGA CCGCCACCCC CATCGGCCTC 
ACCGTCACCC AGACCCTGGC CCTCCCCGCC CTGGCCGGCG CGCGCATCGT CGCCGGGCAC
GCCGGGCACG ACCGCGTCGT GGAGCGCGTC AACGTGATGG AGGTCCCGGA CATCCTCCCG
TGGGTCAAGC CCAAGGAGCT CCTGCTCACC ACCGGCTACC CGCTGCGCCA CTCGCCCTCG
CCGCTCACCG ACCTGATCGG CGACCTGGAC CGCGCCGGGC TGTCCGCCAT CGCCATCAAG
CCGCACCGCT ACCTCGGCGA CCTGCCGCCC GAGCTCCTCG CCGCCGCCGA CGCGCTGGGC
TTCCCGGTGA TCGAGCTGCC CGAGGGTGTG GCCTTCGACG ACATCCTCAC CGACGTCCTG
TCCGACATCC TCGACCGCCA GTCCGCGGTC CTGGCGCGCG TTGACCACGT CCACCGCTCG
CTGGCGCAGA TCGCGCTGGA GGGCGGCGGC CTGGCCGAGC TCACCGCCGA GCTGGCGCAC
ATCCTCGGCG GCCCGGTGCT GGTCACGACG CCGGATGGCC GCGTCCTGGC CGAGTGCGGC
GCCGAGACCG TCTGCCACCT GCCCTGTTTC GACGCCGCCC CCGAAGACGC CGACCACCGC
CTGCGCACCG AGGCCGAGCA GCCCGGCCTG ACCACCCACC ACGGCGCGCA GCACGCGCTG
GTCCCGATCG TCGCCGGCCG CGTCGACCAC GGCCGCCTGG TCGCCTTCGC CGGCCGCCGC
GCCTTCGACG CCGCCGACGT CGCCGCCCTC GAACGCGCCG CCACGGTCGC CGCCCTCGCG
GTGCTCAAGC AGCTCGCGGT CGCCGCGGTC GAGGACAAGT ACCGCGCCGA CTTCCTCAGG
GACCTGCTGA CCGGTCGCCT GGACGACCCG CAGTCAGCCG CCGCCCACGC CGCCACCCTC
GGCTGGGACA TCGGACCGGG ACACGCCCCA GGACACAGCA ACGGCGGAAT CACGAGAACC
GCTATAGGCG CGGGCAACGG TTCGCCCACC GGCGCCAACA CCCGCGCCGA CGCGACCGTC
ACCGCCACGT CCGCCGCCAC CCGCCCCACC CCCAAACCCC CCACCCCCGA CTCCCGCCAC
CTCGTGGTCC TCGTCGCCGA ACTCGACCCC GGCCAGTCCG TCCTCCCCGC CTCCCAGCAC
GCCCTGCGCC CCGCCCGCGA ACGCTTCGCC GCCGCCTGGC AGACCGTCGT CGCCGCCCGC
GACCGCACCA ACCCCGTGGC GGGCTTCAAC CAGGAAGTCG TCGTCGTCCT CAAGACCGGC
GACGACCCCG ACCCCCAGGT CAGAAGCCTG ATCGCGGAAG TCTCCGGCAC CGGTGGAGGC
GGACGCCGCA CCTTCTCCAC GGGCGTCTCC CGCCGCGTCG CCACCGTCGC CGACCTCCCC
GCCGCCTACG AGGAGGCCCG CCGCGCGGTC CGCATGGGAC GCCGCCTGAA CGGTCCCGGC
TCCGTCGCCC ACTTCGACGC CCTCGGCGTC TACCGCCTGC TCTCCCTGGT CCCCGACCCC
GACGAGCTGC GCGACTTCGC CCGCCAGACG CTCAAGGGCC TCGCCGCCGA CGGCGATCCC
GACGCCGAGG ACCTGCGCAT GACCCTGGAA GTCCTGCTCG ACACCAACCT GAACGTCGCC
GAAGCCGCCC GCCGCCTGCA TTTCCACTAC AACACCCTGC GATACCGCAT AGGCAAGATC
GAACGCCTCG TCGGCCCGTT CATGGAGCGT CCGGACCTCC GGCTGGACCT CTCGGTAGCT
CTCCGTATCT TGCACATGAG GGGACTGTGA
 
Protein sequence
MAAKHGSTGE TTMTATPIGL TVTQTLALPA LAGARIVAGH AGHDRVVERV NVMEVPDILP 
WVKPKELLLT TGYPLRHSPS PLTDLIGDLD RAGLSAIAIK PHRYLGDLPP ELLAAADALG
FPVIELPEGV AFDDILTDVL SDILDRQSAV LARVDHVHRS LAQIALEGGG LAELTAELAH
ILGGPVLVTT PDGRVLAECG AETVCHLPCF DAAPEDADHR LRTEAEQPGL TTHHGAQHAL
VPIVAGRVDH GRLVAFAGRR AFDAADVAAL ERAATVAALA VLKQLAVAAV EDKYRADFLR
DLLTGRLDDP QSAAAHAATL GWDIGPGHAP GHSNGGITRT AIGAGNGSPT GANTRADATV
TATSAATRPT PKPPTPDSRH LVVLVAELDP GQSVLPASQH ALRPARERFA AAWQTVVAAR
DRTNPVAGFN QEVVVVLKTG DDPDPQVRSL IAEVSGTGGG GRRTFSTGVS RRVATVADLP
AAYEEARRAV RMGRRLNGPG SVAHFDALGV YRLLSLVPDP DELRDFARQT LKGLAADGDP
DAEDLRMTLE VLLDTNLNVA EAARRLHFHY NTLRYRIGKI ERLVGPFMER PDLRLDLSVA
LRILHMRGL