| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_1812 |
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| Symbol | |
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| ID | 8333155 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 2056135 |
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| End bp | 2058255 |
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| Gene Length | 2121 bp |
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| Protein Length | 706 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644954962 |
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| Product | helicase c2 |
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| Protein accession | YP_003112574 |
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| Protein GI | 256391010 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG1199] Rad3-related DNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGAACT CTGGCGGGGC CACCCCCGAG ACTCCCACAG ACGACCTGAC GCCCCTGCTC
GACGCGGCAG TGGAGGCGTT GGGCGGACAG ACGCGCCCGG GCCAGATCGC GATGGCCAAG
GCCGTCGCGG CCAGCCTTGA CGACCGGGTG CACCTGCTGG TGCAGGCCGG CACCGGAACC
GGCAAGTCGC TGGCGTACCT GGTCCCGGCC CTGGCGCACC ACAAGCGCGT GATCGTGGCC
ACGGCGACCC TGGCGTTGCA GCGCCAGCTG GTCGCGCACG ACCTGCCGCG GCTGGCCGCG
GCGATAACGC CGCTGATCAA GCGCGAGCCG GCGTTCGCGC TGCTCAAGGG GCGCAACAAC
TACGTCTGCC TGAACAAGGT CGAGGGCGGC GCCGCCGAGG ACCCCGGGCA GGACGTGCTC
TTCGACCCGC TCGCGGTCGG CAAGCTCGGC GCCGAGGTGC TGCGGGTCCG GGAATGGGTC
GAGGAGACCG AGTCCGGGGA CCGCGACGAC CTCTCGCCGG GCGTGTCGGA CCGGGCGTGG
GCGCAGGTGT CGGTCTCGGC GCGGGAGTGC CTGGGATCCA AGTGCCAGTT CTTCGAGGAC
TGCTTCGCCG AGCAGGCCAA GGAGCTGGCG CGCTCGGCGG ACGTGGTCGT CACCAACCAC
GCGCTGCTGG CCATCGCGGC CATGGACGGG GATGTGCAGG TGCTGCCCGA GCACGACGCC
GTCATCGTCG ACGAGGCGCA CGAGCTGGTG AACCGCGTGA CCTCGGCGGC GACCGGCGAG
CTGACCAAGA CCGCGGTCGA GCGCGCGCAC CACCGCACCG ACAAGTTCGT GAAGGAGGCG
ACGGCCGCGA ACCTGGCCGT GGCGACCCTG GACTTCACCG AGGCGCTGGA GAACACCCCC
GAGGGCCGCT TCCAGCGCGG GCTGCCCGAG GAACTGGGCA TGGCGCTGGT CGCGCTGCGC
GACGCCAGCC GCTCGGCGTT GACCGAGCTG TCCAAGAACA AGGGCGGCGA CCTGGACATG
GACGGCGCCC GGAAGCAGGC GCGGGCCGCG ACCGAGGCGG TGCACCAGGT CGCCGAGCGC
GTGCTGGAAG GCGCCGAGCA GGACGTGGTC TGGCTGGAGC GCAGCGAGTT CAAGGGGATC
AAGAACTCCA CCCTCAAGAT CGCCCCGCTC GGCATCGAGA ACCTGTTGCG CTACAAGATG
TTCGCGCGCA CGCCGGTGGT GCTCACCTCG GCGACGCTGA AGCTCGGCGG CGACTTCACC
GGCGTGGCCG GCAGCGTCGG GCTCCACGGC ACCGAACGCG TCGAGCTGGA CTTCAAGCCC
GAGCTGCCCG AGGAGATCTA CGACGCCGCG GTGAAGCTGC TGCGCGAGGG CGACAGCGAC
GGCGAGGAGT TCCTGGACAC GGTCCAGAAC CTGCCGCAGT ACTGGCGCGC CCTGGACGTC
GGCTCGCCGT TCGACTACCC GAAGCAGGGA ATCCTTTACG TCGCGCGGCA TCTGGACCCG
CCGGGCCGCG ACGGCATCCG CGACGATCAG CTGGACATGC TCGCCGACCT GATGGACAAC
GCCGGCGGCC GGACGCTCGG ACTGTTCAGC TCGATGCGCG CGGCGCAGAC CGCGGCGGAG
AAGCTGCGCA CGAAGATCGA CCTGCCGATC CTGTGCCAGG GCGAGGATTC GCTGGCCGAA
CTGCTCCGCA AGTTCGCCGA GGACCCCGAG ACCTGCCTGT TCGGCACGCT GTCGCTGTGG
CAGGGCGTGA ACGTCCCCGG CGCCTCGCTG CAGCTGGTGG TGATCGACCG CATCCCGTTC
CCGCGTCCGG ACGACCCGGT CTCCGCGGCG CGCACCGAGG CGGTGGGACG CAGCGGCGGC
AACGGCTTCA TGGCGGTCTC CGCCTCGCAC GCCGCACTGC TGCTGGCGCA GGGCGCGGGC
CGGCTGATCC GGGCGATCGA CGACAAGGGC GTCGTCGCGG TGCTGGACTC GCGGCTGGCG
ACCAAGCCCT ACGGCAGTTT CCTGCGCGCG TCGATGCCGG CGTTCTGGCA GACCGACGAC
ACCGAGCGGG TGCTGAAGTC GCTGCGGGCG ATCGACGCGA TGGCGAAGAC GGCCGAGGAA
AGCCTGGCCG AGCAGAACTG A
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| Protein sequence | MPNSGGATPE TPTDDLTPLL DAAVEALGGQ TRPGQIAMAK AVAASLDDRV HLLVQAGTGT
GKSLAYLVPA LAHHKRVIVA TATLALQRQL VAHDLPRLAA AITPLIKREP AFALLKGRNN
YVCLNKVEGG AAEDPGQDVL FDPLAVGKLG AEVLRVREWV EETESGDRDD LSPGVSDRAW
AQVSVSAREC LGSKCQFFED CFAEQAKELA RSADVVVTNH ALLAIAAMDG DVQVLPEHDA
VIVDEAHELV NRVTSAATGE LTKTAVERAH HRTDKFVKEA TAANLAVATL DFTEALENTP
EGRFQRGLPE ELGMALVALR DASRSALTEL SKNKGGDLDM DGARKQARAA TEAVHQVAER
VLEGAEQDVV WLERSEFKGI KNSTLKIAPL GIENLLRYKM FARTPVVLTS ATLKLGGDFT
GVAGSVGLHG TERVELDFKP ELPEEIYDAA VKLLREGDSD GEEFLDTVQN LPQYWRALDV
GSPFDYPKQG ILYVARHLDP PGRDGIRDDQ LDMLADLMDN AGGRTLGLFS SMRAAQTAAE
KLRTKIDLPI LCQGEDSLAE LLRKFAEDPE TCLFGTLSLW QGVNVPGASL QLVVIDRIPF
PRPDDPVSAA RTEAVGRSGG NGFMAVSASH AALLLAQGAG RLIRAIDDKG VVAVLDSRLA
TKPYGSFLRA SMPAFWQTDD TERVLKSLRA IDAMAKTAEE SLAEQN
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