| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_1807 |
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| Symbol | |
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| ID | 8333150 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 2048199 |
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| End bp | 2050568 |
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| Gene Length | 2370 bp |
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| Protein Length | 789 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 644954957 |
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| Product | Pyridoxal-dependent decarboxylase |
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| Protein accession | YP_003112569 |
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| Protein GI | 256391005 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0076] Glutamate decarboxylase and related PLP-dependent proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0000170312 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.0915506 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCTGAGC ACATCAACGA AGACCCCAGC ACCGCCCCCC ACCCCCCCAC CCGCCCCGGC
GCCCCGGTAG ACATCGGCGA AATGAGCGGC ATCGAAGCCG ACGTCCTCCG CGGAGTCCTC
CGAGCCGAAC CCGTAGGACA CCTGGCGACG ACGAACACCG CCGCCACGCA AGACGCGACC
GGCCTCGCGA TGAGCATCAC GGCGAACCAG GCCGCGAATC TCGGCGCTCT GCCCGCCACA
CAAGCCGATC GCCGCACGCC GCAGAGCCTT GCCAGCGCCG ATCTGGCCAC CGCCGGCCTG
GTCAGCGCCG GCAGCCTCGC TACCAGCCAG ATCGCCGAAC TCGGTGCCGC ACCCGACACG
CAAGTCGATC GCCGGATGCA GCAGAGCCTT GCTATCGCCG ATCTGGCCAA CCCCGGCAGC
CTCGCTGCCA ACCAGATCGC CGAGCTCAGT ACCGCACCCG CGCCGCCTCT CGCCCATCTG
GCGCCGCCGA ACTTGACCGC TGCCGAGCCG AACTCCGACC TGGCCAGCCC CAGCAACCTC
GCCCCCACCC CCGAGCCGCC GCTCAGCCAC CTCGCACCGC CCGCCGATCT GACCAACCCC
GGCAGCCCTG CTGCCAACCA GATCGCCGAG CTCAGTACCG CACCCGCGCC GCCTCTCGCC
CACCTGGCGC CGCCGAACTT CACGGCTGTC GAGCCGAACT CCAACCTGCT CAGCCCCGGC
AGCCTCGCCC CCACCCCCGA GCCGCCGCTC GCCGACCTCG CCTCCCCGAG CCCTCCGGCC
TTCGAGCTGG CGGGCGGCTC GGCGGGCGCG ATCGCCGCCA CTCTCGCTGC GCACGCCGGT
GCCCCTGCCG TCGACGCCGC CGCCCTGGCC TCCGGTCCCG CCGGTACCGG CGCCCTCGCC
CTCTTCCTCG CGACCGTGCT CGACGGTCTC GACCGCGGCC GCGCCGACTG GCTTGGTCCC
CTCCCGCCCG GCGGGCCGCA GGCCGTGCGC GATGCGGTCG CCGCCAGCGG CTTCGGCGTG
CTCCCGGACA AGGGTCAGGA CCCCTTCGAG ACCCTCGCTT CCCTCGGTCG TCTCCTCGCC
TGGGGTTCCG CCGATCCCGC GCACCCGCAC TGCGCCGCGC ATCTGCACTG CCCGCCGCTC
GCGACCAGTG TCGCGGCCGA GACCGCTGTC GCCGCGCTGA ACCAGTCGCT CGACTCCTGG
GATCAGTCGC CGGCTGCCGG TGAGATCGAG GAGCGCGTTG TGCGGACCCT GACTCGTGCC
GTCGGTTACT CCGGCTCCAG TGCGGGGGTC CTCACCTCCG GCGGTACCGA GTCCAATCTC
ATGGGCCTGC TGCTCGCCCG CGACGATGTC CTGCGCCGGC GCTTTGATGC CGATCCTGAC
CTCGACGGCG TTCCGCCTTT CGCCGCCGGG CGGCTTCGCA TCGTCGCTTC CGAGCAGGCG
CACTTCTCCA TCGCGCGCAA TGCCGCGATC CTCGGTCTCG GTGAGCGCTG CGTCGTGCCC
GTGGCCTCGG ACGCCGTGGG GCGGATGCGG CTGGATGCCC TGGCTGAAGC GCTGGACGCG
GTCGCGGAGC GGGATGAGAT CGCGCTGGCC GTCGTCGCCA CCGCCGGGAC CACCGACCTC
GGGGCGATCG ATCCGCTGGC GCCGATCGGC AAGCTCGCGG CGCGGCACGG CGCCTGGTTC
CACGTCGACG CGGCGTACGG CGGCGGGCTG CTGCTCGGCT CCGATCCCGA CGCGCGCCTG
CTCGGGCTGG ATGCCGCCGA CTCCGTCACC CTCGACCTGC ACAAGCTCGG GTGGCAGCCG
GTGCCGGCGG GGTGCTTCCT CGTCAAGCGC GCCGCGTCGC TCAGGACGCT GGAGAAGCGC
GTCTCCTACC TCAACTCCGT GGACGACGAG CAGGCCGGCT ACCCCAGCCT GCTCGGCCGC
TCGCTGCGCA CCACGCGCCG GGCCGACGCG GTGAAGCTCG CCGCCGCCTT CCAGGCGCTG
GGGCGCGAAG GCTTCCAGCA GCTCATCGAC CGCTGCCTGG CACTGACGCG CTATGCGGCG
GCGGCGGTCC GGCAGCACGC GGACCTGGAG CTCACCGCCG AGCCGCAACT GACCACCGTG
CTGTTCCGCT ACCTGCCGCC GGATCTCCGC GACACCGATC GCGTCAACGG GGTCCTGCGG
CGGCATCTGC TCGAGGCCGG ACGCGCCGTC CTCGGGCGCA CCGAGCTGGC GCGCGAGCGG
CCGGGGACGC CTCCCGGCCG GGTGCGGCTC AAGCTCACCC TCCTCAACCC GCACACCACC
GAGCACCAGA TCGACGCTCT GCTGGCCGCC GTCCGCGCCG CCGGCGGCGC CGCTTCCTCC
TCCTCGGCTT TCGTCAGGGG CCCGTCATGA
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| Protein sequence | MSEHINEDPS TAPHPPTRPG APVDIGEMSG IEADVLRGVL RAEPVGHLAT TNTAATQDAT
GLAMSITANQ AANLGALPAT QADRRTPQSL ASADLATAGL VSAGSLATSQ IAELGAAPDT
QVDRRMQQSL AIADLANPGS LAANQIAELS TAPAPPLAHL APPNLTAAEP NSDLASPSNL
APTPEPPLSH LAPPADLTNP GSPAANQIAE LSTAPAPPLA HLAPPNFTAV EPNSNLLSPG
SLAPTPEPPL ADLASPSPPA FELAGGSAGA IAATLAAHAG APAVDAAALA SGPAGTGALA
LFLATVLDGL DRGRADWLGP LPPGGPQAVR DAVAASGFGV LPDKGQDPFE TLASLGRLLA
WGSADPAHPH CAAHLHCPPL ATSVAAETAV AALNQSLDSW DQSPAAGEIE ERVVRTLTRA
VGYSGSSAGV LTSGGTESNL MGLLLARDDV LRRRFDADPD LDGVPPFAAG RLRIVASEQA
HFSIARNAAI LGLGERCVVP VASDAVGRMR LDALAEALDA VAERDEIALA VVATAGTTDL
GAIDPLAPIG KLAARHGAWF HVDAAYGGGL LLGSDPDARL LGLDAADSVT LDLHKLGWQP
VPAGCFLVKR AASLRTLEKR VSYLNSVDDE QAGYPSLLGR SLRTTRRADA VKLAAAFQAL
GREGFQQLID RCLALTRYAA AAVRQHADLE LTAEPQLTTV LFRYLPPDLR DTDRVNGVLR
RHLLEAGRAV LGRTELARER PGTPPGRVRL KLTLLNPHTT EHQIDALLAA VRAAGGAASS
SSAFVRGPS
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