Gene Caci_1748 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_1748 
Symbol 
ID8333091 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp1978116 
End bp1979171 
Gene Length1056 bp 
Protein Length351 aa 
Translation table11 
GC content70% 
IMG OID644954898 
Productferredoxin 
Protein accessionYP_003112510 
Protein GI256390946 
COG category[C] Energy production and conversion 
COG ID[COG0633] Ferredoxin
[COG1018] Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.764981 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCTTGC TTCCTGTCGT CGGGGTGGAC CGGCTCACTG ATGACGCCGT GCGTGTCGTG 
TTCGAGGTGC CGTCGGGGGA GCGGGATGTG TTCCGCTTTG TGCCGGGGCA GCACGTCACG
GTGCGGATGG AGCTGGGTGG GATTGAGGCT CGGCGTGCTT ATTCGCTGTG TGCCGCGCCT
TCGGGGGAGG GTGGGGCTGC GCGGCTGAGT ATCGCGGTCA AGGAGCTGGG ACCGGGTGGG
TTCGGGGAGA TCGCGGCGAG CAGGTTGGGG GTCGGGGATC TCGTCGATGT GCTGGCGCCT
GCGGGGCGGT TCGTCTTGCA GGGGGGCGCC GAGCATGTCG GTATCGTCGC CGGGAGCGGG
GTGACGCCGG TCTTGGCCAT GGCCGAGGTC GCGTTGGCTC GCGGGGATCG CTTCACTCTG
ATTTACGGCA ATCGGACTGC TGCCTCTGTC ATGTTCCTGG AGGAGCTGGC CGATCTCAAG
GATCGTTACG CCGAACGGCT GATGGTGCTG CACGTGCTGT CGCGGGAGCC GCGGGAGGCG
CCGCTGCTTA CCGGGCGGAT CGACGCCGAG CGGCTGCCGG AGCTGCTCGC CGCCGCGTCG
CCGGGTCCTG ACGCGCACTA TTACGTCTGC GGGCCGATGG CGATGGTCGA CATGGCGAAG
GACGTGCTGG CCGAGCGCGG TGTGTCGCGC GCGCACGTCC ACTTCGAGCT CTTCCACGCC
GAGGACGCGC CGCCTCCGGC CGCCTACGCC GAGACCGCCA AGGTCCTGGC CGACGGCGAC
GTCGCGGTGA CCGTGACGCT CGGCGGCCGC CGCACGGAGC TGGCCATGTC CAAGGACGAC
GACTCGGTCC TCGCCGCCGT CCTCAAGGCC CGCCCCGACA CCCCCTACTC CTGCACCGGC
GGCGTCTGCG GCACCTGCCG CGCGAAGCTC GTCGAGGGCG ACGTCGCGAT GGCCCACGAC
TACGCCCTGG AGCCGGAGGA GAAGGCGGAG GGCTTCGTCC TGGCGTGCCA GTCCCGCCCT
CTCACCCCCG CGGTGGAGCT GGATTTCGAC GCCTAA
 
Protein sequence
MTLLPVVGVD RLTDDAVRVV FEVPSGERDV FRFVPGQHVT VRMELGGIEA RRAYSLCAAP 
SGEGGAARLS IAVKELGPGG FGEIAASRLG VGDLVDVLAP AGRFVLQGGA EHVGIVAGSG
VTPVLAMAEV ALARGDRFTL IYGNRTAASV MFLEELADLK DRYAERLMVL HVLSREPREA
PLLTGRIDAE RLPELLAAAS PGPDAHYYVC GPMAMVDMAK DVLAERGVSR AHVHFELFHA
EDAPPPAAYA ETAKVLADGD VAVTVTLGGR RTELAMSKDD DSVLAAVLKA RPDTPYSCTG
GVCGTCRAKL VEGDVAMAHD YALEPEEKAE GFVLACQSRP LTPAVELDFD A