Gene Caci_1619 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_1619 
Symbol 
ID8332962 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp1841815 
End bp1843926 
Gene Length2112 bp 
Protein Length703 aa 
Translation table11 
GC content72% 
IMG OID644954769 
Productserine/threonine protein kinase 
Protein accessionYP_003112381 
Protein GI256390817 
COG category[K] Transcription
[L] Replication, recombination and repair
[R] General function prediction only
[T] Signal transduction mechanisms 
COG ID[COG0515] Serine/threonine protein kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.682192 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.0463489 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCTGGGG AACACGACAA CGAGCAGGAC AGCCACGGCG TGGAGGGGAT CCTGGTAGCC 
GGGCGGTACC GGCTCGTGGA ACGGCTGGGC GCCGGCGGCA TGGGGCGCGT CTGGAAGGCG
CACGACGAGG CGCTGGACTG CGACGTGGCG GTCAAGGAGG TCTGGCTGCC GCCGATGCTC
TCGGACAGCG AGCGCGCCGA GCGCCTCGCG CGGGCGCAGC GCGAGGCCCG CAACGCCGCG
CGGATGCGCA ACCACCCGCA CATCGTCTCG GTGCACGACA TGGTCTCCGA CCGCGGGCTG
CCGTGGATCA TCATGGACCT GATCCCCTCG CAGAACCTGA TGCAGGCCGT CGAGCAGTTC
GGCCCGCTGC CCCAAGAGCA GGTCGCCAAG ATCGGCCTCG GCGTGCTGGA CGCGCTGACC
GCCAGCCACG CCGCGGGCAT CCTGCACCGC GACGTGAAGC CGGCGAACGT GCTGCTCACC
ACCGACGGCC GGGTGCTGCT CACCGACTTC GGCATCGCGG TCCAGGAGGC CGACCTGACC
ATGACGGCCT CCGGCGTCCT GGTCGGCTCC CCGGAGTTCG TGGCGCCCGA GCGCGCCCGC
GGCGAGGCCA GCGACGGCGC CTCGGACCTG TTCTCGCTCG GCGCGACGCT GTACTACGCG
GCCGAGGGGC GCTCCCCCTT CATGCGCGAC ACGGCGGTCG GGGTGCTGAC GGCCATCCTG
TTCGAGGACA CGGCGCCGGT CACGCGGGTG CCCGCGCTGG CGCCGCTGAT CAGCGGGCTG
CTGACGAAGG ACCCCGCGGC GCGCTGGACC GCGGCGCGGG CGCGTCCGGA GCTGGAGCGG
CTGAGCGGGG CGACGCCGAG TTCGGGGACG CTGAGGGAGG CGATACCCGG GTCCGGCGGC
ACGCCGAATC CGTTCGTGCC GTCGACGATG GTGGCCGGGA CGAACGGGGA CAGCAGTACG
CCGGGGGCTA CGGTTCCGGG CCCTCGGGGC GCGAACACTC CTGGGACGGG AACGCCTTTC
CCGGTCTCCA CGGCGCCGGC GACGATGGCC GCTGACGCGG TCGGTCCGAT GGGTGGTCCG
ATGGGCGGTC CGGGCGGGGG GTCGCAGACT CCTTATCCGC CGCAGGCTAT GCCTTTCGGT
CCTGGTCCTG GGGGTCCTGG TCCCTACGGG CCGGGCGGCC CGGGTGGTTC GATGCCGATG
GGCCCGATGG GCCCGGGCAA CGGTCCCGGT TTCGGTCCTG GTCCTGGTCC CGGTTTCGGT
CCTGGCTTCC AGACCAGCCC GATGCCCACG CGGAAGGACA ACACCGGTCG CAACGTCGGC
CTCGCGATCG GCGCGCTGGT CGTGGTCGGC GGCGTCGTCG CGGCGATCGC CCTGTCCGGC
GGCGGCAAGA GCGACAAGGC GACCCCGCCC CCGCCGACCG CCCCGACCTC GGCTTCCGTG
CCGCATTCCT CGGCGCCGTC CTCGGGATCC ACGACGTCCT CGGCGCCGGT GAACGGCCCG
GACTCCTCGC AGCCCTCGAG CCCGTCGGAC TCGGACACGC AGAGCTCGGA CGCCGTCACG
GACCCGGCGA GCTGGGACTC GTCCTCGACG GACCAGACGA CGTTCGACCC CGACTCGCTG
CTGCCGGTGT CGTTCACGGA CTCCAAGGGC GTCGTCTACA CGGCGACCAA CCGCTGGACC
GACAAGTGCG TCAACTCTTA CGAGAGCACG CGGTTGAAGG CCATGCTGAC CCAGTACAAG
TGCGCCGACC AGGCGATCGG CACGTACACC GACAGCGCCG GCCGCGTCAT GGTCGACATA
GCGGTGCTGC CGCTGGCGGA CGCCTCGACG GCGCAGACGG CGTTCAAGGA CATGCAGGCC
AAGAGCGCGT TCACGGTCGA GGACTGGGGC ATCTGGTGCC CCAAGAGCGG GCCCGGCGCG
GACATCTGCA CGTCCGACAA GACCACCGGC GACGCCGAGC AGTACGGCTA CATCCAGCCC
GACCACCGGT ACCTGGTCCA CGCCGTGTCG CTCTACGTGA ACCTCACGAA GGACAAGTCC
GCGCTGACCT GGCTCACCCC CGCCGCCACC AGCGCGGCGA AGCAAGGCGG ACCCCAGGTC
GCGACGCAGT GA
 
Protein sequence
MAGEHDNEQD SHGVEGILVA GRYRLVERLG AGGMGRVWKA HDEALDCDVA VKEVWLPPML 
SDSERAERLA RAQREARNAA RMRNHPHIVS VHDMVSDRGL PWIIMDLIPS QNLMQAVEQF
GPLPQEQVAK IGLGVLDALT ASHAAGILHR DVKPANVLLT TDGRVLLTDF GIAVQEADLT
MTASGVLVGS PEFVAPERAR GEASDGASDL FSLGATLYYA AEGRSPFMRD TAVGVLTAIL
FEDTAPVTRV PALAPLISGL LTKDPAARWT AARARPELER LSGATPSSGT LREAIPGSGG
TPNPFVPSTM VAGTNGDSST PGATVPGPRG ANTPGTGTPF PVSTAPATMA ADAVGPMGGP
MGGPGGGSQT PYPPQAMPFG PGPGGPGPYG PGGPGGSMPM GPMGPGNGPG FGPGPGPGFG
PGFQTSPMPT RKDNTGRNVG LAIGALVVVG GVVAAIALSG GGKSDKATPP PPTAPTSASV
PHSSAPSSGS TTSSAPVNGP DSSQPSSPSD SDTQSSDAVT DPASWDSSST DQTTFDPDSL
LPVSFTDSKG VVYTATNRWT DKCVNSYEST RLKAMLTQYK CADQAIGTYT DSAGRVMVDI
AVLPLADAST AQTAFKDMQA KSAFTVEDWG IWCPKSGPGA DICTSDKTTG DAEQYGYIQP
DHRYLVHAVS LYVNLTKDKS ALTWLTPAAT SAAKQGGPQV ATQ