| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_1560 |
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| Symbol | |
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| ID | 8332902 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 1765540 |
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| End bp | 1766187 |
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| Gene Length | 648 bp |
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| Protein Length | 215 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 644954709 |
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| Product | alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen |
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| Protein accession | YP_003112322 |
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| Protein GI | 256390758 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1225] Peroxiredoxin |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.00611643 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.0244521 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCTCCC CGAACGGACC GCCTGACGGC GGTCCTTCCA TCCATCCCCC CAGCAGCCCG
GTGCCCTCCG ACCCGGTCGG AAGCAGCGGG TCGGGCACCG GCGGGCCCGG TACCGGCGGA
TTCGGAACCG GCGGGCCCGA ACCCGCTTCG GAACCGGGCT CGCAGGACCG GGCCGAGCAG
CCGCCGCCTC CCCGGGCCGG CGATCGGGCG CCGGTCTTCA CCCTGACCGA CCAGCACGGG
CAGAGCGTCT CCCTGACGGA TTTCCGGGGG AAGCAGGCCG TGCTGCTGGT CTTCTACCCC
TTCGCCTTCT CCCGGGTCTG CGGCTCGGAA CTGCAGGCGA TCCACGAGAG CGTCGAGGAC
TTCCAGAACG AGCGCGTCCA GGTGCTCGCC GCGTCGTGCG ACGCGCTCTA CTCGCTGCGC
GCGTACGCCG ACGAGGCCGG CTTCGGCTTC CCGCTGCTGG CCGACCACTG GCCGCACGGC
GGGGCGGCGC GCGCGTACGG GGTCTTCGAC GCCGAGCGCG GTTGCGCCGT CCGAGGGACC
TTCCTGATCG ACCATGAGGG CGTCGTCCGC TGGACCGTGG TGAACGGCCT GGCGGACGCC
CGCTCACTGG ACGACTACCG GGCGGCGCTC GCCGCGGCCG GCGTATAA
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| Protein sequence | MSSPNGPPDG GPSIHPPSSP VPSDPVGSSG SGTGGPGTGG FGTGGPEPAS EPGSQDRAEQ
PPPPRAGDRA PVFTLTDQHG QSVSLTDFRG KQAVLLVFYP FAFSRVCGSE LQAIHESVED
FQNERVQVLA ASCDALYSLR AYADEAGFGF PLLADHWPHG GAARAYGVFD AERGCAVRGT
FLIDHEGVVR WTVVNGLADA RSLDDYRAAL AAAGV
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