Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_1535 |
Symbol | |
ID | 8332874 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 1739733 |
End bp | 1740284 |
Gene Length | 552 bp |
Protein Length | 183 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644954681 |
Product | transcriptional regulator, PadR-like family |
Protein accession | YP_003112297 |
Protein GI | 256390733 |
COG category | [K] Transcription |
COG ID | [COG1695] Predicted transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.918183 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.0405313 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGGAGT TCGCGATCCT CGGCTTCCTC TTCGAAGCCC GACTGCACGG CTACGAGCTG CGCAAGCGGC TGGCCGCGCT GACCGGCCAC ATCCGCCCGA TCGCGGACGG CACCCTCTAT CCGGCGATCA AGCGCCTCGT GGAGGGCTGC TTGGTGATCA AGAACCTGGA GGCGGGGTCG ATCGCCGCGC CCCGGCACAT GCTGGAGCTG ACCCCGGCCG GCCGCGACAA ACTGCTGCGG ATGCTGCGCG AGCCCCCCGA GGTCTTCGTC ACTGATGAGA ACCACTGGTT CTGCCTGCTG GCGTTCCTGC GCCACCTCGA CGACCCGGCG GCGCAGGCCG CGGTCCTGCG GCGCCGCCTG GAGTTCCTGA GTGTCCCGGC GAGCTTCTTC TATGAGGACG ATCACGCGCT GAGCGCTGAG GAGGTCGGCG ACCCGTTCCG GCGCGGTGTG CTGGAGATCG CGCGTGTGAC CAGTCGCACT GAGCTGAAGT GGCTGGACGC GACCATCGAG GAGCTCGATG AACTGAGCGG TCACTCGGGC GTGGGAAACT AG
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Protein sequence | MLEFAILGFL FEARLHGYEL RKRLAALTGH IRPIADGTLY PAIKRLVEGC LVIKNLEAGS IAAPRHMLEL TPAGRDKLLR MLREPPEVFV TDENHWFCLL AFLRHLDDPA AQAAVLRRRL EFLSVPASFF YEDDHALSAE EVGDPFRRGV LEIARVTSRT ELKWLDATIE ELDELSGHSG VGN
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