Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_1465 |
Symbol | |
ID | 8332804 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 1668311 |
End bp | 1669282 |
Gene Length | 972 bp |
Protein Length | 323 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 644954613 |
Product | UDP-glucose 4-epimerase |
Protein accession | YP_003112229 |
Protein GI | 256390665 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1087] UDP-glucose 4-epimerase |
TIGRFAM ID | [TIGR01179] UDP-glucose-4-epimerase |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.000880176 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTTTGC TGGTCATTGG GGGCGCCGGA TACGTCGGGT CGGTCACCTC CGCGGTGTTG GTCGAGGCCG GGCACGAGGT GACGGTCGTG GACGACCTGT CCACCGGGCA CCGGGACGCG GTGCCGGCCG GGGCGGCGTT CCGGCACGCG GACGTGCTGG ACCAGCGGCA GCTCGGCGAC GTGCTGCGGG AGGTCGCAGC CGGCGGTCCG ATCGACGCGA TCCTGCACTT CGCGGCGCGC TCGCTGGTCG GGGAGTCGGT CGTCGAGCCG GCCCGGTACT TCCGGCACAA CATCACCACC ACGGCGAACC TGCTGGAGGC GATGCGCGAC CACGGCATCG GCACGATCGT CTTCTCCTCG ACCGCCGCCT GCTACGGCGA GCCGGACGCC ACGCCGATCA CCGAGGACAT GCCCACGGTC CCGACGAACC CCTACGGCGC CTCGAAGCTG GCCGCCGACC AGATGCTGAC GTTCGCCGCC CCGGCGTACG GCATCGCCGC GGTGTCGCTG CGGTACTTCA ACGTCGCCGG CGCCTACGGT CCCCAGGGCG AGCGGCACGA GGTGGAGACC CACCTGATCC CGCGGCTGCT GGACGTCGCC GCCGGGAACG CGCCGGAGGC CTCGGTGTTC GGCACCGACT ACCCGACGCC GGACGGGACC GCGATCCGCG ACTACATCCA CGTGCGGGAC CTGGCTGAGG CGCACCTGCT GGCGCTCGGC GCGGCGAAGC AGGGCGAGCA CCTGATCTGC AATCTGGGCA CCGGGACCGG TTTCTCGGTC TACGAGGTGC TCGAAGCCGT GCGCAAGGCG ACCGGCGCGG CGGTACCGGC GGCGGAGAAG CCGCGGCGTG CGGGCGACCC GGCGCGGCTG GTGGCCTCAG CGGAGCGGGC GCGCACCGTG CTGGGCTGGA GCCCGGAGCG GACGGAGCTG TCCGAGACCG TCGCGGACGC CTGGGCCTTC TATCGTCGTT AG
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Protein sequence | MRLLVIGGAG YVGSVTSAVL VEAGHEVTVV DDLSTGHRDA VPAGAAFRHA DVLDQRQLGD VLREVAAGGP IDAILHFAAR SLVGESVVEP ARYFRHNITT TANLLEAMRD HGIGTIVFSS TAACYGEPDA TPITEDMPTV PTNPYGASKL AADQMLTFAA PAYGIAAVSL RYFNVAGAYG PQGERHEVET HLIPRLLDVA AGNAPEASVF GTDYPTPDGT AIRDYIHVRD LAEAHLLALG AAKQGEHLIC NLGTGTGFSV YEVLEAVRKA TGAAVPAAEK PRRAGDPARL VASAERARTV LGWSPERTEL SETVADAWAF YRR
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