Gene Caci_1465 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_1465 
Symbol 
ID8332804 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp1668311 
End bp1669282 
Gene Length972 bp 
Protein Length323 aa 
Translation table11 
GC content73% 
IMG OID644954613 
ProductUDP-glucose 4-epimerase 
Protein accessionYP_003112229 
Protein GI256390665 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1087] UDP-glucose 4-epimerase 
TIGRFAM ID[TIGR01179] UDP-glucose-4-epimerase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000880176 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTTTGC TGGTCATTGG GGGCGCCGGA TACGTCGGGT CGGTCACCTC CGCGGTGTTG 
GTCGAGGCCG GGCACGAGGT GACGGTCGTG GACGACCTGT CCACCGGGCA CCGGGACGCG
GTGCCGGCCG GGGCGGCGTT CCGGCACGCG GACGTGCTGG ACCAGCGGCA GCTCGGCGAC
GTGCTGCGGG AGGTCGCAGC CGGCGGTCCG ATCGACGCGA TCCTGCACTT CGCGGCGCGC
TCGCTGGTCG GGGAGTCGGT CGTCGAGCCG GCCCGGTACT TCCGGCACAA CATCACCACC
ACGGCGAACC TGCTGGAGGC GATGCGCGAC CACGGCATCG GCACGATCGT CTTCTCCTCG
ACCGCCGCCT GCTACGGCGA GCCGGACGCC ACGCCGATCA CCGAGGACAT GCCCACGGTC
CCGACGAACC CCTACGGCGC CTCGAAGCTG GCCGCCGACC AGATGCTGAC GTTCGCCGCC
CCGGCGTACG GCATCGCCGC GGTGTCGCTG CGGTACTTCA ACGTCGCCGG CGCCTACGGT
CCCCAGGGCG AGCGGCACGA GGTGGAGACC CACCTGATCC CGCGGCTGCT GGACGTCGCC
GCCGGGAACG CGCCGGAGGC CTCGGTGTTC GGCACCGACT ACCCGACGCC GGACGGGACC
GCGATCCGCG ACTACATCCA CGTGCGGGAC CTGGCTGAGG CGCACCTGCT GGCGCTCGGC
GCGGCGAAGC AGGGCGAGCA CCTGATCTGC AATCTGGGCA CCGGGACCGG TTTCTCGGTC
TACGAGGTGC TCGAAGCCGT GCGCAAGGCG ACCGGCGCGG CGGTACCGGC GGCGGAGAAG
CCGCGGCGTG CGGGCGACCC GGCGCGGCTG GTGGCCTCAG CGGAGCGGGC GCGCACCGTG
CTGGGCTGGA GCCCGGAGCG GACGGAGCTG TCCGAGACCG TCGCGGACGC CTGGGCCTTC
TATCGTCGTT AG
 
Protein sequence
MRLLVIGGAG YVGSVTSAVL VEAGHEVTVV DDLSTGHRDA VPAGAAFRHA DVLDQRQLGD 
VLREVAAGGP IDAILHFAAR SLVGESVVEP ARYFRHNITT TANLLEAMRD HGIGTIVFSS
TAACYGEPDA TPITEDMPTV PTNPYGASKL AADQMLTFAA PAYGIAAVSL RYFNVAGAYG
PQGERHEVET HLIPRLLDVA AGNAPEASVF GTDYPTPDGT AIRDYIHVRD LAEAHLLALG
AAKQGEHLIC NLGTGTGFSV YEVLEAVRKA TGAAVPAAEK PRRAGDPARL VASAERARTV
LGWSPERTEL SETVADAWAF YRR