| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_1464 |
|---|
| Symbol | |
|---|
| ID | 8332803 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | + |
|---|
| Start bp | 1667594 |
|---|
| End bp | 1668238 |
|---|
| Gene Length | 645 bp |
|---|
| Protein Length | 214 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 644954612 |
|---|
| Product | protein of unknown function DUF162 |
|---|
| Protein accession | YP_003112228 |
|---|
| Protein GI | 256390664 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1556] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.00626202 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 0.905183 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGAGG CGAAGGGCCG GATCCTGGAA CGCGTCCGCT CGGGGTTGCG CGACGTGCCC
CGCGACGAGC GCGCCGAAGA CGTCGAGGTC ACCCGCGCCT ACGTCGACAG CCACGCGCCC
GGCGACCCCG GCGCCGTCGT CGAGCTGTTC GCCGAACGCG TCGCGGACTA CCGCGCCACG
GTCGTCCGCG TCGCGGAGTC CGGCGCGCCG GAGGAGATCG CCCGGATCCT CACCGAGCAC
GCCGTCGCGA ATCTCGTTGT CCCGCCTGGC TTTCCGGACG CGTTGGTAGC TCGGTACGAA
GGTTCGCGCC TGTCCGACGA GCCGCCGCTG ACCCCCGCGG AACTCGACGC GTCCGACGGC
GTCATCACCC TGGCGGCGCA GGGGATCGCG GTGACCGGGA CCATCGTGCT GGACGCCGGG
CCCGGGCAGG GGCGGCGCGC GCTCTCGCTC GTTCCCGACC TGCACCTGTG CGTCGTGCGC
GCCGCTCAGG TCGCCGCCGA CGTGCCGATC GCGATCCGCT CCCTGGTACC GACGCGGCCG
ACCACCTTCA TCTCCGGGCC TTCAGCGACC TCTGACATCG AGCTGGACCG GGTCGAGGGC
GTGCACGGGC CGCGGACCCT GGTGGTTGTG TTGATTTCTG AGTGA
|
|---|
| Protein sequence | MSEAKGRILE RVRSGLRDVP RDERAEDVEV TRAYVDSHAP GDPGAVVELF AERVADYRAT
VVRVAESGAP EEIARILTEH AVANLVVPPG FPDALVARYE GSRLSDEPPL TPAELDASDG
VITLAAQGIA VTGTIVLDAG PGQGRRALSL VPDLHLCVVR AAQVAADVPI AIRSLVPTRP
TTFISGPSAT SDIELDRVEG VHGPRTLVVV LISE
|
|---|
| |