Gene Caci_1463 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_1463 
Symbol 
ID8332802 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp1666140 
End bp1667597 
Gene Length1458 bp 
Protein Length485 aa 
Translation table11 
GC content70% 
IMG OID644954611 
Productiron-sulfur cluster binding protein 
Protein accessionYP_003112227 
Protein GI256390663 
COG category[C] Energy production and conversion 
COG ID[COG1139] Uncharacterized conserved protein containing a ferredoxin-like domain 
TIGRFAM ID[TIGR00273] iron-sulfur cluster-binding protein 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0261337 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.617254 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGGCG ACCAGGTCAA CGTCGTCTGG CTGGGCTCGC CGACGTTCCC CCAGGCAGCG 
CATGACGCCC TGCAAGACAC CCAGCTGCGC CGCAACCTGA AGCACGCGAC GACCACCATC
CGCGACAAGC GGTTGCGGGC TGTCGCAGAG CTCGATGACT GGGAGACGCT GCGCGAAGCC
GGCTCCCAGA TCAAGGACCG CGTGATGCGG CATCTGGACG AGTACCTGCT TCAGTTGGAG
GCTTCGGTCA CGGCCGCCGG CGGTGTCGTG CACTGGGCCG AGGACGCACG CGAGGCCAAC
CGGATCGTCA GCGAACTGGT GCGGGCCAAG GGCGCGACCG AGGTCGTGAA GATCAAGTCC
ATGGCGACCC AGGAGATCGG GCTCAACGAG GCGCTCGAGG ACGACGGGAT CGAGGCCACC
GAGACCGACC TCGCCGAGCT GATCGTGCAG CTCAACGACG ACCGCCCCTC GCACATCCTG
GTCCCGGCCA TCCACCGCAA CCGCTCCGAG ATCCGCGACA TCTTCCAGCG GGAGATGGGC
AAGCACGGCA TCGCGGCGCC GGACGATCTC ACCGACGAGC CGCGCGTGCT GGCCGAGGCG
GCGCGCGTGC ACCTGCGGGA GAAGTTCCTT CGGGCGAAGG TGGCGATCTC CGGAGCGAAC
TTCGCCTGCG CGGACACTGG GACCGTCGGG GTCGTGGAGT CCGAGGGCAA CGGCCGGATG
TGCCTGACGC TGCCGGAGAC GCTGATCACG GTGATGGGCA TCGAGAAGGT CCTGCCGTCG
TTCAGCGATC TGGAAGTGTT CCTGCAACTG CTGCCGAGGT CGTCGACCGC GGAACGGATG
AACCCCTATA CGTCGCTGTG GACCGGGGTC ACGCCCGGAG ACGGACCGCA GGAGTTCCAC
CTGGTCCTGC TCGACAACGG CCGCACGAAG ACCTTGGCCG ACACGGCGGG ACGGTCGGCG
CTGCACTGCA TCCGGTGCTC GGCGTGCTTG AACGTGTGCC CGGTCTATGA GCGCACCGGC
GGGCGGTCGT ACGGATCGGT GTATCCGGGA CCGATCGGCG CGGTGCTGAC GCCGCAGCTG
GTCGGCGTCG GCACGTCTGA GCACGCTGAT TCACTCCCGT TCGCCTCGAC GCTGTGCGGC
GCGTGCTACG ACGCCTGTCC GGTGCGGATC GACATCCCGG AGATGCTGGT GCACCTGCGG
GCGAAGGTCG TGGACGCGCA TCGGGGCGGC GTGCCGAAGC CCGAGGCGCT GGCGATGAAG
GGCGCGCGGG TGGTCTTCGG CTCGCCGCGC CGGCTGGCGT GGGCGGAGCG GCTGGGCGCG
ATCGGCGGCC GGGTCGCCGG CATCGGCGGC GGACGCTGGC TGCCGGGACC GGCGAGGAAG
TGGACGGGGG CGCGGGACGT GCCGGTGCCG GCGCGGGAGT CGTTCCGGGC ATGGTGGCGG
AAGGCGGGAC GGCGATGA
 
Protein sequence
MSGDQVNVVW LGSPTFPQAA HDALQDTQLR RNLKHATTTI RDKRLRAVAE LDDWETLREA 
GSQIKDRVMR HLDEYLLQLE ASVTAAGGVV HWAEDAREAN RIVSELVRAK GATEVVKIKS
MATQEIGLNE ALEDDGIEAT ETDLAELIVQ LNDDRPSHIL VPAIHRNRSE IRDIFQREMG
KHGIAAPDDL TDEPRVLAEA ARVHLREKFL RAKVAISGAN FACADTGTVG VVESEGNGRM
CLTLPETLIT VMGIEKVLPS FSDLEVFLQL LPRSSTAERM NPYTSLWTGV TPGDGPQEFH
LVLLDNGRTK TLADTAGRSA LHCIRCSACL NVCPVYERTG GRSYGSVYPG PIGAVLTPQL
VGVGTSEHAD SLPFASTLCG ACYDACPVRI DIPEMLVHLR AKVVDAHRGG VPKPEALAMK
GARVVFGSPR RLAWAERLGA IGGRVAGIGG GRWLPGPARK WTGARDVPVP ARESFRAWWR
KAGRR