Gene Caci_1416 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_1416 
Symbol 
ID8332755 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp1612632 
End bp1613459 
Gene Length828 bp 
Protein Length275 aa 
Translation table11 
GC content64% 
IMG OID644954564 
Producthypothetical protein 
Protein accessionYP_003112180 
Protein GI256390616 
COG category[S] Function unknown 
COG ID[COG0393] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.265711 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.0385868 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTCAGC AGAATGGTCC CATATCGCAG CAACAGCAGC CTTTGCCGGA GTCGGCTCGG 
GGGCGGTTGG TGCAGTCGCA GCAGGGGCGG GGTTGTTTTA CGTCGGACTT GTCGGTGAAT
GAGTTCGTGT TGGCTGCGCA GGCTGGGTTT GTGCCGGTGG GGTTGGTGAT GGGGACGAGT
ATCTATCACA TTGGGATTCA GCCTGCGCGG TGGAATGCTA GTCAGGAGTT GACGGTGTTG
ACGCAGGCTA TGTACACCGC GCGGGAGTTG GCTATGGCTC GTATGGAGGC TGAGGCCGAT
GTGCTGGGTG CTGATGGGAT CATCGGGGTT GAGGTGCGGG CTCGGCGGTA TGCGTTTTCG
GCTGAGATCA TGGAGTTTGT TGCCATTGGG ACGGCGGTGA AGGCTGAGGG CGGCACCATG
GCGTTGCGGA CGCCTGCCGG GCGGCCGTTC ACCTCGCATC TGTCGGGGCA GGACTTCTGG
ACGTTGTGGC AGCACGGTTG GGTGCCGCGG GCGCTGGTCC TTGGTACGTG CGTGTACCAC
GTCGCGCATC TGACGTTCCG GCAGGCGCTT CAGGCTTCGG GTCAGAACAC GGAGCTGGGC
ACGTACACCC AAGCCGTCTA CGACGCCCGC GAGATCGCCA TGGGACGCAT GCAGTACGAG
GGCAACCAGG TCGGTGCGGA CGGCATCGTG GGCGTCACGG TGCACGAGAA CGACTGGGTG
TGGGGCGAGC ACGCGATCGA GTTCTTCGCG ATGGGGACGG CGGTGAGCAA GCTCCATCAG
GACGCCTCGC CGGTGTCGCC GCAGATGACG ATGCCGCTGA CGGACTGA
 
Protein sequence
MAQQNGPISQ QQQPLPESAR GRLVQSQQGR GCFTSDLSVN EFVLAAQAGF VPVGLVMGTS 
IYHIGIQPAR WNASQELTVL TQAMYTAREL AMARMEAEAD VLGADGIIGV EVRARRYAFS
AEIMEFVAIG TAVKAEGGTM ALRTPAGRPF TSHLSGQDFW TLWQHGWVPR ALVLGTCVYH
VAHLTFRQAL QASGQNTELG TYTQAVYDAR EIAMGRMQYE GNQVGADGIV GVTVHENDWV
WGEHAIEFFA MGTAVSKLHQ DASPVSPQMT MPLTD