Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_1416 |
Symbol | |
ID | 8332755 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 1612632 |
End bp | 1613459 |
Gene Length | 828 bp |
Protein Length | 275 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 644954564 |
Product | hypothetical protein |
Protein accession | YP_003112180 |
Protein GI | 256390616 |
COG category | [S] Function unknown |
COG ID | [COG0393] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.265711 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.0385868 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTCAGC AGAATGGTCC CATATCGCAG CAACAGCAGC CTTTGCCGGA GTCGGCTCGG GGGCGGTTGG TGCAGTCGCA GCAGGGGCGG GGTTGTTTTA CGTCGGACTT GTCGGTGAAT GAGTTCGTGT TGGCTGCGCA GGCTGGGTTT GTGCCGGTGG GGTTGGTGAT GGGGACGAGT ATCTATCACA TTGGGATTCA GCCTGCGCGG TGGAATGCTA GTCAGGAGTT GACGGTGTTG ACGCAGGCTA TGTACACCGC GCGGGAGTTG GCTATGGCTC GTATGGAGGC TGAGGCCGAT GTGCTGGGTG CTGATGGGAT CATCGGGGTT GAGGTGCGGG CTCGGCGGTA TGCGTTTTCG GCTGAGATCA TGGAGTTTGT TGCCATTGGG ACGGCGGTGA AGGCTGAGGG CGGCACCATG GCGTTGCGGA CGCCTGCCGG GCGGCCGTTC ACCTCGCATC TGTCGGGGCA GGACTTCTGG ACGTTGTGGC AGCACGGTTG GGTGCCGCGG GCGCTGGTCC TTGGTACGTG CGTGTACCAC GTCGCGCATC TGACGTTCCG GCAGGCGCTT CAGGCTTCGG GTCAGAACAC GGAGCTGGGC ACGTACACCC AAGCCGTCTA CGACGCCCGC GAGATCGCCA TGGGACGCAT GCAGTACGAG GGCAACCAGG TCGGTGCGGA CGGCATCGTG GGCGTCACGG TGCACGAGAA CGACTGGGTG TGGGGCGAGC ACGCGATCGA GTTCTTCGCG ATGGGGACGG CGGTGAGCAA GCTCCATCAG GACGCCTCGC CGGTGTCGCC GCAGATGACG ATGCCGCTGA CGGACTGA
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Protein sequence | MAQQNGPISQ QQQPLPESAR GRLVQSQQGR GCFTSDLSVN EFVLAAQAGF VPVGLVMGTS IYHIGIQPAR WNASQELTVL TQAMYTAREL AMARMEAEAD VLGADGIIGV EVRARRYAFS AEIMEFVAIG TAVKAEGGTM ALRTPAGRPF TSHLSGQDFW TLWQHGWVPR ALVLGTCVYH VAHLTFRQAL QASGQNTELG TYTQAVYDAR EIAMGRMQYE GNQVGADGIV GVTVHENDWV WGEHAIEFFA MGTAVSKLHQ DASPVSPQMT MPLTD
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