| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_1412 |
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| Symbol | |
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| ID | 8332751 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 1605167 |
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| End bp | 1606837 |
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| Gene Length | 1671 bp |
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| Protein Length | 556 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 644954560 |
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| Product | type III restriction protein res subunit |
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| Protein accession | YP_003112176 |
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| Protein GI | 256390612 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG1061] DNA or RNA helicases of superfamily II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00105152 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.0540272 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGGTG GGTTCCTCTC AGCTGAGGCG CTGCTCGCCG CTGGCCCACG CGGGCTGCCG
CATGCCGTCG AACGCGCGCT ATGGCATCTC GGTTTCTCCG ACGTTCGAAT CGTCGACGGC
TCCGGGGACG ACGGCGCGGA CCTTCTCGCC GTTCGTGATC GGGAGCAGTG GGTCTTCCAA
TGCAAGTGGT CGAGTAACCG CGCGATCGAT CGGCAAGGCG TCGATGACCT CGAGCGCGCA
CGTCACACGT ACCGTGCCGA CAAGGCCGTA CTGGTCACGA ACATCGGCTT GAACCGCTCC
GCCGAGGAGA GGCGAAGTGC CCTGGAGTCC ATTGGCATCA ACATCACGAC GTGGACCGGC
CCGACCCTCG CGTCAATCTG GGAGCGGATG CCGGTTCGGG TTCCAGCCAC ATTCGACCTT
CGGGACTACC AAGTCACGGC GGCCAACCGA GTGGAGGCCG ACTTGCGTGA TCACGGAAGC
TCCCTGCTCG TCCTCGCCAC TGGTTTGGGC AAGACGGTCA TTGGCGGCGA AGTGATCAGA
AGGCACCTCG CCGATCGGCC GGACGCGGCC GTGCTCGTCG CCGCGCACAT GAAAGAGCTC
GTCGAACAAT TGGAACGGGC ACTCTGGCGG CATCTAGGCA AGGACGTCCC CACCCGCCTG
GTCACTGGAG ACCACAAACC TCCAGCCCTC GACGGTGTCG TGGTGGGGAC GGTGGAGTCA
GTGTTGGGCC TTGTGCGCTC GGGAAGACTC ACCCCGTCGC TGGTGATGAT CGATGAGACG
CATCACGTCA GCGAGAACGG AAGATTTGCG GAACTGCTTG ATCTGTGTGG TGATGCCGCC
AGGTTTGGCG TGACAGCCAC GCCGTGGCGC GGGGACAAGT TCGACATCAC GTCCCGCTTC
GGGCGCCCAA GTTTCAAGAT GAGCATCGCC GAAGGCATGT CCGCCGGCTA CCTCTCAGCG
GTCGACTACA GGATCTTCGT CGACAACATC GACTGGGAGT TCGTACGGCG AGCGAGTGAT
CACCAGTACT CCATCAAAGA GCTGAACCGA CAACTATTCC TGCCGCAGCG CGATGAGGAG
ATCTTGGAGT TCTTCCGTAC CGCGTGGCGA GAGACCCGCG ACCCAAGAGC CATCCTGTTC
TGCCAGACCA TCGAACACGC GGAGCACATC GCGAAACTCC TCGCCACAGC CGACTCCGCC
TGGCAACGAG CCACATTCCT GCACAGCGGG TTGTCTCGGC AAAGGCGCCA GATCCTGCTC
AACGAGTTCC GACTCGGCCG GGTACCGGTG ATCACCTGCG TGGACGTGTT CAACGAAGGT
GTCGACGTAC CCGACGTCAA CTTGATCGGG TTCCTTCGCG TCACGCACAG CCGGCGGATC
TTCGTCCAGC AACTCGGCCG AGGCCTACGT CTAAGCCCGG GCAAGAAGGA ACTCAAGGTG
CTCGATTTCG TCACAGACAT CCGGCGCGTA GCGGCCACCC TTGACCTGCG AAGATCGCTC
GATGAATCAG AGTCCGAACA TCTGAGGTTG GCCGCGCCAC ATGCCGGCGT CCGCTTCAGT
GACGAGACCG CCGGAAGCCT TCTCGATAAT TGGATCAAGG ACGCGGCTGA TTTGGAGACG
GCCGCGGACG AGGTAAGACT GCAGTTTCCT GAGAATTGGG GGATTGACTA A
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| Protein sequence | MSGGFLSAEA LLAAGPRGLP HAVERALWHL GFSDVRIVDG SGDDGADLLA VRDREQWVFQ
CKWSSNRAID RQGVDDLERA RHTYRADKAV LVTNIGLNRS AEERRSALES IGINITTWTG
PTLASIWERM PVRVPATFDL RDYQVTAANR VEADLRDHGS SLLVLATGLG KTVIGGEVIR
RHLADRPDAA VLVAAHMKEL VEQLERALWR HLGKDVPTRL VTGDHKPPAL DGVVVGTVES
VLGLVRSGRL TPSLVMIDET HHVSENGRFA ELLDLCGDAA RFGVTATPWR GDKFDITSRF
GRPSFKMSIA EGMSAGYLSA VDYRIFVDNI DWEFVRRASD HQYSIKELNR QLFLPQRDEE
ILEFFRTAWR ETRDPRAILF CQTIEHAEHI AKLLATADSA WQRATFLHSG LSRQRRQILL
NEFRLGRVPV ITCVDVFNEG VDVPDVNLIG FLRVTHSRRI FVQQLGRGLR LSPGKKELKV
LDFVTDIRRV AATLDLRRSL DESESEHLRL AAPHAGVRFS DETAGSLLDN WIKDAADLET
AADEVRLQFP ENWGID
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