Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_1411 |
Symbol | |
ID | 8332750 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 1604583 |
End bp | 1605167 |
Gene Length | 585 bp |
Protein Length | 194 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 644954559 |
Product | hypothetical protein |
Protein accession | YP_003112175 |
Protein GI | 256390611 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0000824248 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.0594436 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTAAGC GACTAACGGC AGAGGTAGAA GAGAAGATCG TCCGATGCCT GTTCCTGGAG GCCGACGCCC TCCGCTGGGC TCACCTGCCT CTCGGCAAAA AGACGGAGAT GTACGAGAAG TGGGCAACCG ACCCGGAGAT CGGTGGCAAG CTCAAGGATT TCATGACCCT TGAGCAGGTC CGAGTATGGA TCAAGGACGG AGTGATGAAG GAGTACGCAC GCGCTCTTTA TGGTGAAGGC AAGTACGCTC CGCTAGTACC GAACCCAGCG GCCAGCCTCG ACCAGCTAGT CAACTCCGCG CTTGGTTCCG GCTGGAATGC TCTCCCAGGC ACGAGGCGAA TCAAGCCGAT GCGAGTCCGA GCCCTCAAAG GTGAGCAAAC AGTCACTCTG ACGTGGGCAG ACTCGGCGGC CAACTTCAAG CACCTCGTTT GGGCCGCGCT GTCGGCCATC GCCGACGGCG ATCAGACGGA CTGGGTCCTT TGTGTAGTTG ACTCGTTCGA AAGCCCAACG CCTGACGACA TCAAGAAGCA TCACAAGCGC ATCGCCGAAC GATGCCGGCT TCGCGTGGTG CACATCAACC CATGA
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Protein sequence | MTKRLTAEVE EKIVRCLFLE ADALRWAHLP LGKKTEMYEK WATDPEIGGK LKDFMTLEQV RVWIKDGVMK EYARALYGEG KYAPLVPNPA ASLDQLVNSA LGSGWNALPG TRRIKPMRVR ALKGEQTVTL TWADSAANFK HLVWAALSAI ADGDQTDWVL CVVDSFESPT PDDIKKHHKR IAERCRLRVV HINP
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