Gene Caci_1411 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_1411 
Symbol 
ID8332750 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp1604583 
End bp1605167 
Gene Length585 bp 
Protein Length194 aa 
Translation table11 
GC content59% 
IMG OID644954559 
Producthypothetical protein 
Protein accessionYP_003112175 
Protein GI256390611 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000824248 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.0594436 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTAAGC GACTAACGGC AGAGGTAGAA GAGAAGATCG TCCGATGCCT GTTCCTGGAG 
GCCGACGCCC TCCGCTGGGC TCACCTGCCT CTCGGCAAAA AGACGGAGAT GTACGAGAAG
TGGGCAACCG ACCCGGAGAT CGGTGGCAAG CTCAAGGATT TCATGACCCT TGAGCAGGTC
CGAGTATGGA TCAAGGACGG AGTGATGAAG GAGTACGCAC GCGCTCTTTA TGGTGAAGGC
AAGTACGCTC CGCTAGTACC GAACCCAGCG GCCAGCCTCG ACCAGCTAGT CAACTCCGCG
CTTGGTTCCG GCTGGAATGC TCTCCCAGGC ACGAGGCGAA TCAAGCCGAT GCGAGTCCGA
GCCCTCAAAG GTGAGCAAAC AGTCACTCTG ACGTGGGCAG ACTCGGCGGC CAACTTCAAG
CACCTCGTTT GGGCCGCGCT GTCGGCCATC GCCGACGGCG ATCAGACGGA CTGGGTCCTT
TGTGTAGTTG ACTCGTTCGA AAGCCCAACG CCTGACGACA TCAAGAAGCA TCACAAGCGC
ATCGCCGAAC GATGCCGGCT TCGCGTGGTG CACATCAACC CATGA
 
Protein sequence
MTKRLTAEVE EKIVRCLFLE ADALRWAHLP LGKKTEMYEK WATDPEIGGK LKDFMTLEQV 
RVWIKDGVMK EYARALYGEG KYAPLVPNPA ASLDQLVNSA LGSGWNALPG TRRIKPMRVR
ALKGEQTVTL TWADSAANFK HLVWAALSAI ADGDQTDWVL CVVDSFESPT PDDIKKHHKR
IAERCRLRVV HINP