Gene Caci_1403 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_1403 
Symbol 
ID8332741 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp1593840 
End bp1595768 
Gene Length1929 bp 
Protein Length642 aa 
Translation table11 
GC content75% 
IMG OID644954551 
Productserine/threonine protein kinase 
Protein accessionYP_003112167 
Protein GI256390603 
COG category[K] Transcription
[L] Replication, recombination and repair
[R] General function prediction only
[T] Signal transduction mechanisms 
COG ID[COG0515] Serine/threonine protein kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGGCAGGG CGATCGGAAG CAGGTACGAG CTCGACGACG AGATCGGCCG CGGTGCGTTC 
GGCGCGGTCT GGCGCGGCCG CGTGCGCGCG ACCGGCGAGG CCGTCGCCAT CAAGGTGCTC
CTCGAGGAGT TCGCAGCCGA CGCCGACGTG GTGACGCGGT TCCTGCGCGA GCGCGCGGCG
CTGGTCGGTC TGAACCACCG CTCCCTGGTG CGGCTGCGCG ACCTGGTCGT CGAGGGCGAC
ATCCTGGCGC TGGTGATGCA GTTGGTCGAG GGCCCGGACC TGAAGAAGTA CCTGGCCGGG
CGCGGGCGCC TGGCGCCGGA CGAGGCCGGG CTGCTGGTCG CCGAGGTCGC CGAGGGCATG
GCCGTGGCGC ACTCGGCCGG CATCGTGCAC CGCGACATCA AGCCCGCCAA CGTGCTGCTG
GAGCAGGCCG ACGGCGGTCT GCGGCCGCTG CTGACCGACT TCGGCATCGC CCGGATCGCC
GACGCGCCCT CGGTGACCCG CACCCACCAG GTCGTCGGCA CCCCCTACTA CCTGGCGCCG
GAGGTGGTGG CCGGGAAGAA GGCCACGCCG GCCGCCGACG TGTACGCCGC CGGCATCATG
GTCTACGAGC TGATCACCGG CCACCCGGTC TTCCGCGGCC CGGACGCGGT CAGCGTCTTC
CGCCAGCACA TGAACACCGT CCCGGAGCGT CCCGCCGAGA TCCCGCAGCG GCTGTGGCCG
GTCATCGCCG CGGCGCTGGT CAAGGAGCCG GAGGCGCGGC CCTCGGCGAC CGTGCTGGCC
GCTCAGCTGC GGGCCGCCAT CGGGCGCAGC GTGGAGGGCC CGGACGGCGA GCCCACGCAC
CACCTGCCGG TGGAGGGGCA GTACGGGACG CTGCGCCTGC CGCCGATGGG CCTGGCCGCC
GCCGGCGCCG CCGCCTCGGG TGACTCCTCG CAGCCCGGCT CCTCCGGCCA GGGCTCGGCC
GCCTCGGCGT CGGCCGGCGC CCCGACCACC GCGTTGCCGG CCGTCTCCCC GGCTGCGGCC
GCGGCAGCTG CCAAGGCGGC CTCCGCAGCC GCCTCGGCCA TCGAGCCGAC CGTCCCGGTG
GTCCGCCCCG CCGCGTCCTC CGCGCCGCTC CCGCAGCGCG CGGCGCGGAT GGACGGCAAG
ATCGCCGGCT GGGACGCGCC CTCGGAGCCG GACGCCATAG GAGCCGGCGT CTCCCGCCGC
CCCGCCGAGC CCGGCAAGGT CCCCGGCTGG GACGCCCCCT CGGACCCCGA CGCGATCGGC
GCCGGCGTCT CCCGCCGCGC CAACAGCCCG CAGCAGCCGC TCCCGCCGCA GATGCAGCGC
CAGATCGAGC AGCTCCACAA GGAGCGCCAG CAGGAGTCGG CGCCGTCCCA CCAGCAGCGC
CTGGCCTCCT ACCCGCCGCA GCCGCAGTTC GCCCCGCAGG GCTACCAGCA GCCCGGTCCC
CAGGGCTACC AGCAGCCGGC GCCCGGCCAG CCCTACCCGG CGCAGAACCA GGGCTATCAG
CCCACGCAGT TCCAGGGCAG CGTCCCGGCG CCGCCGCGGC CGGTTGCCCA GGCGCCGACC
CATCAGCAGC GCCAGGCGCC GCCGCGCGAG CGGGAACGGG AGCGGGACCG CGAACGGGAG
CGCGACCGAG ACCGCGAGCC CTCCCGCCCG CCGGTCCAGA AGACGGTCGT CAAGCGCCGC
CGCGGCATGC CGCTGGGCTG TCTGGTCAAG CTCGCGATCC TCGCCCTGAT CGGGTTCGGC
ATCTACACCG GTGTCAACTG GGCCATGGCG AAGGTCAACG GCATCCACCA CGATCTGAAC
AACTGGGTCT CGCGCGAATG GCATGTGATC GCGCAGAAGA TCGACCTGGA GAAGAAGAAG
GCCGTGCCGA AGATCCCGGG CCCGTCGGAC CTCCCGACGT CCTTCCCGGG GTCGGTCACC
ACACCCTGA
 
Protein sequence
MGRAIGSRYE LDDEIGRGAF GAVWRGRVRA TGEAVAIKVL LEEFAADADV VTRFLRERAA 
LVGLNHRSLV RLRDLVVEGD ILALVMQLVE GPDLKKYLAG RGRLAPDEAG LLVAEVAEGM
AVAHSAGIVH RDIKPANVLL EQADGGLRPL LTDFGIARIA DAPSVTRTHQ VVGTPYYLAP
EVVAGKKATP AADVYAAGIM VYELITGHPV FRGPDAVSVF RQHMNTVPER PAEIPQRLWP
VIAAALVKEP EARPSATVLA AQLRAAIGRS VEGPDGEPTH HLPVEGQYGT LRLPPMGLAA
AGAAASGDSS QPGSSGQGSA ASASAGAPTT ALPAVSPAAA AAAAKAASAA ASAIEPTVPV
VRPAASSAPL PQRAARMDGK IAGWDAPSEP DAIGAGVSRR PAEPGKVPGW DAPSDPDAIG
AGVSRRANSP QQPLPPQMQR QIEQLHKERQ QESAPSHQQR LASYPPQPQF APQGYQQPGP
QGYQQPAPGQ PYPAQNQGYQ PTQFQGSVPA PPRPVAQAPT HQQRQAPPRE RERERDRERE
RDRDREPSRP PVQKTVVKRR RGMPLGCLVK LAILALIGFG IYTGVNWAMA KVNGIHHDLN
NWVSREWHVI AQKIDLEKKK AVPKIPGPSD LPTSFPGSVT TP