Gene Caci_1402 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_1402 
Symbol 
ID8332740 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp1590887 
End bp1593727 
Gene Length2841 bp 
Protein Length946 aa 
Translation table11 
GC content73% 
IMG OID644954550 
ProductFHA domain containing protein 
Protein accessionYP_003112166 
Protein GI256390602 
COG category[T] Signal transduction mechanisms 
COG ID[COG1716] FOG: FHA domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGATCC GGCTCACCGT CACCCGAACC CAAGGATCCC GGCAGACTTC CGCTGACGTT 
CTAGTGACCG CCGAGCCGGG CGCCACTTTG TCTTCCGTAG CACAGCAGTT GCGCACCGCC
GCAGGGGTGA GCGCACCGGG ACGGCTGTTC GCCGGGCTGG ATCCGCTGGA GGACGAAGCT
CCCTTGGGAC GGCCGTTACT GGTTGACGGA GCGCGACTGT GGCTGGACGT TCCGGGTACG
CCCGCGACGC TGATCGGGAA TCTCGCTCTA TATGTGGTGT CCGGTCCGGA CGCCGGAGGG
GTCCATCTCC TCACTCCTAA GGATGATGGT TACGGAGGAG AACTCCCCAT CCGGATCGGG
CGTGGCTCGG ATGCGGACAT CCGTGTAGAT GATCCCGATA TCTCCCGTAT CCACGCTGAG
CTACTGGTTC GCCACGAACA CGAAGCTGTG TCTGCTAACG GCTATGTGCG CGTATACGTG
CGCGACCTCG GTTCCACCAA CGGCATGACC CTGGACGGCG CACAGGTCGG CGGCGCTCCG
GTGGAGATGC GTCCGGGCTC TCTGTTGCGT ATGGGGGAAT CCTCTATAGC GCTGTCTGTA
GAGGCCGGCG GAGTACCGGA CCTACCTGTG CATCCCGATG GCAACGGCCA TGTGTCGGTC
GGCCGGATCG GCTGGGGACG CGGTCCGGTG GATCCGCCAC AGGTGCGCAT CGACCTCCCG
CCGCGCCCGT CGGACAAGGG ACGCCCCGCA ACGCGCCGTA TCGCTATGGA GCAGTACGAG
CAGGAGCGCG CGGACGTCGA CCGCCGGATC GCCGCCGCAC TCACCGCGGA GGCGCGCATC
CGGCGCGAGG CGGCGCCGGA CCCGGCGACG CTTCTGGTGT CCGCGGTACG CCCCGACGCG
CGCCTGTGGG AGCGCCGTCC CGGAGAGCCG GACTTCCTGC GGCTGCGCCT GGGGACCGGC
GCGCTGCCGT CGAACGTGAC CGTGGTCGGC GGCAAGGCGG TGCATCCGCG GGTCCCGACC
GTGCCGGTGA CCGTGGACCT GGCGCAGTCT GGCGTCGTCG GCCTGGTGGG CCCGCGGCCG
GAGCTGGCGC GCCTGGCGCG CTACGCGCTC GCTCAGGTCG CCGGGGCACA CAGCCCGAAG
TACGTCGAGA TCGTGATGCT GGTACCGGAG TCCGCCGGCG AGCACGGCGC GCCGGCCGGC
GAGGAGCACT GGCGCTGGAC GCGCTGGCTG CCGCACCTGC TGCCCGAGGA CGACCAGGAC
TGCTCGCGGC TGCTGGGTCT GGGCCCGGAG CAGGCGCGGG CCCGGCTCGG CGAGCTGGTC
GACCGGATCC GGCAGCGCAC CGGCCGGACG CCCGCGCCCG GTCCGGGGAC GGCCGCGACG
CCGGACTCCG GCCGCGCGGT GGTCCTGGTC GTCGACCCGA TCCGGGCGCT GTCCGGCTCC
CCGGAGCTGA ACGAGGTGCT GGCCGAGGGA CCGTCGGCCG GCGTGTTCAC CCTCTGTCTG
GCCGAGCGCG CCGGCGACCT GCCGCCGCAG ACCGGTGCGA TGGTCACACT GGGCGGCGAG
GTCAACTCCC GGCTGCGCGT CGACACCCCG GACGCCGCGC CGGTCGAGGG CGCCGTGGCG
GACATGGTGT CGGTGGCGTG GGCGGACCGT TTCGCCCGGG CCCTGGCGCC ACTGCGGGAC
CGCACCGACA CCCCGACTTC TCCGGACGAG CAGACCCGCA TCGACCGGGT CTCTCCCACC
TCGCAGCTGC CGGAGCAGGT GCGCCTGCTG GAGCTGCTCG GCCTGGACCT GCTGACGCCG
GCCAAGCTGT CCGCGCGCTG GGCGGCGTAC CCGGCCACGC CGCGGATCGC GCTGGGCCGG
GTCGCGGACG GTCCGTTGGC CGCCGAGCCC GCGCACGTGC TGATCGGCGG CGACTCCCGC
TCGGGCGTGT CGGAGCTGGT GCGCGCGGTG GTCGCCGGGC AGGCCGCGAC CAACCACCCG
GACACCCTGG ACATCGCGCT GGTCTCGGCC GGGCCCGGCA AGCCGCTGGC GCCGTGCGAG
GACCTGCCGC ACGTCTTCGA GTACGTCGAC GCCTCCGCGG TCGGCGACGA GGCGCTGGTG
CGGCTGGTGC GGCGGCTGGA GTACGAGCTC GACCAGCGGG AGTGGCCGCC GGACGACGAG
CAGGACGGGT ATGCCGGCGG GCCGGGCGCG GGAGCGCCTC CGGGAGCCGG CGCGATGCCG
CCGACCGGCG GGCAGTACGG CACGGCGCTG GTGCCCTCCA GCGGCGCTGC CCCAGGACGC
AAGGCGCCGC CGCGGATACT GCTGGCCGTC GACAACCTGA CCGCGCTCGC CGCCGAGCAC
CCGGCGTTCG TGGAGACGCT CGCCGGGCTG GCCGACCGCG GGCGGCGGTT CGGACTGCGG
ATAGTGCTCG GTGCCTCGGT CATCGACACC GCCGGGTATG GCGCGCCGGG CAACGCCACC
GGCGAGCGCG CGCTCCTGGC GGCGCTGAGC GCTCCGGTGT GCCTGGCCGC CGATCTGCGC
GTGGCGATGC AGACCTCGAG CCCCGAGGCG CTGCGGCTGA TGCTGGGCTC CGGGGCGACC
ACGGCGGCGC CGGGCGGGCC GTATCTGCCG GGGCGCGGAC AGGCGAAGCT GACGTCCGGG
GCGGTGGTGC CGTTCCAGGC GGCCGGGATC GGCGTGCCGA TGGCGTCTTC GGCGTCGCCG
TCGAACCGGC CTAGTGTGCG TATTCAGGAT TGGCACGAGT TGGGCGAGCA AGTGCGGGTC
GTGCGCGCCC GGCGGGACGC GGACAGCGGA CCGACGGACC TCACGCTGTT GATCGGCGCG
CTGAAGAAGG CTGTGGAGTA G
 
Protein sequence
MQIRLTVTRT QGSRQTSADV LVTAEPGATL SSVAQQLRTA AGVSAPGRLF AGLDPLEDEA 
PLGRPLLVDG ARLWLDVPGT PATLIGNLAL YVVSGPDAGG VHLLTPKDDG YGGELPIRIG
RGSDADIRVD DPDISRIHAE LLVRHEHEAV SANGYVRVYV RDLGSTNGMT LDGAQVGGAP
VEMRPGSLLR MGESSIALSV EAGGVPDLPV HPDGNGHVSV GRIGWGRGPV DPPQVRIDLP
PRPSDKGRPA TRRIAMEQYE QERADVDRRI AAALTAEARI RREAAPDPAT LLVSAVRPDA
RLWERRPGEP DFLRLRLGTG ALPSNVTVVG GKAVHPRVPT VPVTVDLAQS GVVGLVGPRP
ELARLARYAL AQVAGAHSPK YVEIVMLVPE SAGEHGAPAG EEHWRWTRWL PHLLPEDDQD
CSRLLGLGPE QARARLGELV DRIRQRTGRT PAPGPGTAAT PDSGRAVVLV VDPIRALSGS
PELNEVLAEG PSAGVFTLCL AERAGDLPPQ TGAMVTLGGE VNSRLRVDTP DAAPVEGAVA
DMVSVAWADR FARALAPLRD RTDTPTSPDE QTRIDRVSPT SQLPEQVRLL ELLGLDLLTP
AKLSARWAAY PATPRIALGR VADGPLAAEP AHVLIGGDSR SGVSELVRAV VAGQAATNHP
DTLDIALVSA GPGKPLAPCE DLPHVFEYVD ASAVGDEALV RLVRRLEYEL DQREWPPDDE
QDGYAGGPGA GAPPGAGAMP PTGGQYGTAL VPSSGAAPGR KAPPRILLAV DNLTALAAEH
PAFVETLAGL ADRGRRFGLR IVLGASVIDT AGYGAPGNAT GERALLAALS APVCLAADLR
VAMQTSSPEA LRLMLGSGAT TAAPGGPYLP GRGQAKLTSG AVVPFQAAGI GVPMASSASP
SNRPSVRIQD WHELGEQVRV VRARRDADSG PTDLTLLIGA LKKAVE