Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_1402 |
Symbol | |
ID | 8332740 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 1590887 |
End bp | 1593727 |
Gene Length | 2841 bp |
Protein Length | 946 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 644954550 |
Product | FHA domain containing protein |
Protein accession | YP_003112166 |
Protein GI | 256390602 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG1716] FOG: FHA domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGATCC GGCTCACCGT CACCCGAACC CAAGGATCCC GGCAGACTTC CGCTGACGTT CTAGTGACCG CCGAGCCGGG CGCCACTTTG TCTTCCGTAG CACAGCAGTT GCGCACCGCC GCAGGGGTGA GCGCACCGGG ACGGCTGTTC GCCGGGCTGG ATCCGCTGGA GGACGAAGCT CCCTTGGGAC GGCCGTTACT GGTTGACGGA GCGCGACTGT GGCTGGACGT TCCGGGTACG CCCGCGACGC TGATCGGGAA TCTCGCTCTA TATGTGGTGT CCGGTCCGGA CGCCGGAGGG GTCCATCTCC TCACTCCTAA GGATGATGGT TACGGAGGAG AACTCCCCAT CCGGATCGGG CGTGGCTCGG ATGCGGACAT CCGTGTAGAT GATCCCGATA TCTCCCGTAT CCACGCTGAG CTACTGGTTC GCCACGAACA CGAAGCTGTG TCTGCTAACG GCTATGTGCG CGTATACGTG CGCGACCTCG GTTCCACCAA CGGCATGACC CTGGACGGCG CACAGGTCGG CGGCGCTCCG GTGGAGATGC GTCCGGGCTC TCTGTTGCGT ATGGGGGAAT CCTCTATAGC GCTGTCTGTA GAGGCCGGCG GAGTACCGGA CCTACCTGTG CATCCCGATG GCAACGGCCA TGTGTCGGTC GGCCGGATCG GCTGGGGACG CGGTCCGGTG GATCCGCCAC AGGTGCGCAT CGACCTCCCG CCGCGCCCGT CGGACAAGGG ACGCCCCGCA ACGCGCCGTA TCGCTATGGA GCAGTACGAG CAGGAGCGCG CGGACGTCGA CCGCCGGATC GCCGCCGCAC TCACCGCGGA GGCGCGCATC CGGCGCGAGG CGGCGCCGGA CCCGGCGACG CTTCTGGTGT CCGCGGTACG CCCCGACGCG CGCCTGTGGG AGCGCCGTCC CGGAGAGCCG GACTTCCTGC GGCTGCGCCT GGGGACCGGC GCGCTGCCGT CGAACGTGAC CGTGGTCGGC GGCAAGGCGG TGCATCCGCG GGTCCCGACC GTGCCGGTGA CCGTGGACCT GGCGCAGTCT GGCGTCGTCG GCCTGGTGGG CCCGCGGCCG GAGCTGGCGC GCCTGGCGCG CTACGCGCTC GCTCAGGTCG CCGGGGCACA CAGCCCGAAG TACGTCGAGA TCGTGATGCT GGTACCGGAG TCCGCCGGCG AGCACGGCGC GCCGGCCGGC GAGGAGCACT GGCGCTGGAC GCGCTGGCTG CCGCACCTGC TGCCCGAGGA CGACCAGGAC TGCTCGCGGC TGCTGGGTCT GGGCCCGGAG CAGGCGCGGG CCCGGCTCGG CGAGCTGGTC GACCGGATCC GGCAGCGCAC CGGCCGGACG CCCGCGCCCG GTCCGGGGAC GGCCGCGACG CCGGACTCCG GCCGCGCGGT GGTCCTGGTC GTCGACCCGA TCCGGGCGCT GTCCGGCTCC CCGGAGCTGA ACGAGGTGCT GGCCGAGGGA CCGTCGGCCG GCGTGTTCAC CCTCTGTCTG GCCGAGCGCG CCGGCGACCT GCCGCCGCAG ACCGGTGCGA TGGTCACACT GGGCGGCGAG GTCAACTCCC GGCTGCGCGT CGACACCCCG GACGCCGCGC CGGTCGAGGG CGCCGTGGCG GACATGGTGT CGGTGGCGTG GGCGGACCGT TTCGCCCGGG CCCTGGCGCC ACTGCGGGAC CGCACCGACA CCCCGACTTC TCCGGACGAG CAGACCCGCA TCGACCGGGT CTCTCCCACC TCGCAGCTGC CGGAGCAGGT GCGCCTGCTG GAGCTGCTCG GCCTGGACCT GCTGACGCCG GCCAAGCTGT CCGCGCGCTG GGCGGCGTAC CCGGCCACGC CGCGGATCGC GCTGGGCCGG GTCGCGGACG GTCCGTTGGC CGCCGAGCCC GCGCACGTGC TGATCGGCGG CGACTCCCGC TCGGGCGTGT CGGAGCTGGT GCGCGCGGTG GTCGCCGGGC AGGCCGCGAC CAACCACCCG GACACCCTGG ACATCGCGCT GGTCTCGGCC GGGCCCGGCA AGCCGCTGGC GCCGTGCGAG GACCTGCCGC ACGTCTTCGA GTACGTCGAC GCCTCCGCGG TCGGCGACGA GGCGCTGGTG CGGCTGGTGC GGCGGCTGGA GTACGAGCTC GACCAGCGGG AGTGGCCGCC GGACGACGAG CAGGACGGGT ATGCCGGCGG GCCGGGCGCG GGAGCGCCTC CGGGAGCCGG CGCGATGCCG CCGACCGGCG GGCAGTACGG CACGGCGCTG GTGCCCTCCA GCGGCGCTGC CCCAGGACGC AAGGCGCCGC CGCGGATACT GCTGGCCGTC GACAACCTGA CCGCGCTCGC CGCCGAGCAC CCGGCGTTCG TGGAGACGCT CGCCGGGCTG GCCGACCGCG GGCGGCGGTT CGGACTGCGG ATAGTGCTCG GTGCCTCGGT CATCGACACC GCCGGGTATG GCGCGCCGGG CAACGCCACC GGCGAGCGCG CGCTCCTGGC GGCGCTGAGC GCTCCGGTGT GCCTGGCCGC CGATCTGCGC GTGGCGATGC AGACCTCGAG CCCCGAGGCG CTGCGGCTGA TGCTGGGCTC CGGGGCGACC ACGGCGGCGC CGGGCGGGCC GTATCTGCCG GGGCGCGGAC AGGCGAAGCT GACGTCCGGG GCGGTGGTGC CGTTCCAGGC GGCCGGGATC GGCGTGCCGA TGGCGTCTTC GGCGTCGCCG TCGAACCGGC CTAGTGTGCG TATTCAGGAT TGGCACGAGT TGGGCGAGCA AGTGCGGGTC GTGCGCGCCC GGCGGGACGC GGACAGCGGA CCGACGGACC TCACGCTGTT GATCGGCGCG CTGAAGAAGG CTGTGGAGTA G
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Protein sequence | MQIRLTVTRT QGSRQTSADV LVTAEPGATL SSVAQQLRTA AGVSAPGRLF AGLDPLEDEA PLGRPLLVDG ARLWLDVPGT PATLIGNLAL YVVSGPDAGG VHLLTPKDDG YGGELPIRIG RGSDADIRVD DPDISRIHAE LLVRHEHEAV SANGYVRVYV RDLGSTNGMT LDGAQVGGAP VEMRPGSLLR MGESSIALSV EAGGVPDLPV HPDGNGHVSV GRIGWGRGPV DPPQVRIDLP PRPSDKGRPA TRRIAMEQYE QERADVDRRI AAALTAEARI RREAAPDPAT LLVSAVRPDA RLWERRPGEP DFLRLRLGTG ALPSNVTVVG GKAVHPRVPT VPVTVDLAQS GVVGLVGPRP ELARLARYAL AQVAGAHSPK YVEIVMLVPE SAGEHGAPAG EEHWRWTRWL PHLLPEDDQD CSRLLGLGPE QARARLGELV DRIRQRTGRT PAPGPGTAAT PDSGRAVVLV VDPIRALSGS PELNEVLAEG PSAGVFTLCL AERAGDLPPQ TGAMVTLGGE VNSRLRVDTP DAAPVEGAVA DMVSVAWADR FARALAPLRD RTDTPTSPDE QTRIDRVSPT SQLPEQVRLL ELLGLDLLTP AKLSARWAAY PATPRIALGR VADGPLAAEP AHVLIGGDSR SGVSELVRAV VAGQAATNHP DTLDIALVSA GPGKPLAPCE DLPHVFEYVD ASAVGDEALV RLVRRLEYEL DQREWPPDDE QDGYAGGPGA GAPPGAGAMP PTGGQYGTAL VPSSGAAPGR KAPPRILLAV DNLTALAAEH PAFVETLAGL ADRGRRFGLR IVLGASVIDT AGYGAPGNAT GERALLAALS APVCLAADLR VAMQTSSPEA LRLMLGSGAT TAAPGGPYLP GRGQAKLTSG AVVPFQAAGI GVPMASSASP SNRPSVRIQD WHELGEQVRV VRARRDADSG PTDLTLLIGA LKKAVE
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