Gene Caci_1392 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_1392 
Symbol 
ID8332730 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp1582242 
End bp1583060 
Gene Length819 bp 
Protein Length272 aa 
Translation table11 
GC content73% 
IMG OID644954540 
Productprotein of unknown function DUF1503 
Protein accessionYP_003112156 
Protein GI256390592 
COG category 
COG ID 
TIGRFAM ID[TIGR03083] uncharacterized Actinobacterial protein TIGR03083 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAGGCA AGCCGATGAT GAGCGAGACG GCCAACCCGC ACCTCGTCCA CACGGACCGA 
TTCACTGCCG AGGCAGAGCG CGTGGCGACG CTGCTCGACG GCCTCGGCAC CGACGACTGG
ACCCGTCCGG TCCCGACCTG CCCCGGCTGG ACCGTGCGCA AGGTCGCCCG GCACATCGGC
ACGGCGCACC GCTGGGCGGC GGCGATCGTC CGCTCGCCGG GCAGCGAGGC GGTCAACCCG
CGCAGCCTGG ATCTGGGCTT CCCGGAGTCC AACGCCGGCT ACAGCGACTG GATCCGGGCC
GGCGCCGCGG AACTGGCGCA CGCGGTCCGC GAGGCCGGCC CGGACAAGCC GGTCTGGTCC
TGGGGTCCGG ACCAGCACGC CCGCTTCTGG GCGCGCCGGA TGCTGCACGA GACCACGATG
CACGGCGCCG ACATGATCAT GGCGCTGGGC CGGACACCGG AGTTCGACCC GGCGGTCGCG
GCCGACGGCA TCGACGAGTT CCTGACCGTG CTGCCCTCGG CGGCCGCGTT CTCCCCGAAG
ATCAGGGCCC TGACCGGCGA CGGCGAGACC CTGCACCTGC ACGCCACCGA CGCCGACCCG
GCCTCCGCCG CCGGCGAGCG CGCCGAATGG CTGATCACCC TGGAGCCGAA CGGCTTCCGC
TGGCGCCGCG CGCACGCCAA GGGCGCGGCC GCCGTCCGCG GACCGGTCGG CGAGCTGTAC
CTGTTCCTGT GGCGCCGGCG CTCTCCGGGC GCCCAGGAGA TCGAAGTACT GGGCGACCAC
GTACTGGTGG ACCACTGGGT GACCAACGCC ACCTTCTGA
 
Protein sequence
MEGKPMMSET ANPHLVHTDR FTAEAERVAT LLDGLGTDDW TRPVPTCPGW TVRKVARHIG 
TAHRWAAAIV RSPGSEAVNP RSLDLGFPES NAGYSDWIRA GAAELAHAVR EAGPDKPVWS
WGPDQHARFW ARRMLHETTM HGADMIMALG RTPEFDPAVA ADGIDEFLTV LPSAAAFSPK
IRALTGDGET LHLHATDADP ASAAGERAEW LITLEPNGFR WRRAHAKGAA AVRGPVGELY
LFLWRRRSPG AQEIEVLGDH VLVDHWVTNA TF