Gene Caci_1338 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_1338 
SymbolgltX 
ID8332676 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp1523302 
End bp1524786 
Gene Length1485 bp 
Protein Length494 aa 
Translation table11 
GC content70% 
IMG OID644954486 
Productglutamyl-tRNA synthetase 
Protein accessionYP_003112102 
Protein GI256390538 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0008] Glutamyl- and glutaminyl-tRNA synthetases 
TIGRFAM ID[TIGR00464] glutamyl-tRNA synthetase, bacterial family 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTGAACA CGGACAAGCC CGTGCGCGTG CGCTTCCCCC CCTCGCCCAC CGGCGACCCG 
CACGTCGGCA TGGTCCGCTC GGCGCTGTTC AACTACGCCT TCGCGCGGCA CTACGGCGGC
ACCTTCGTCT TCCGCATCGA GGACACCGAC GCCGCGCGCA ACACCGAGGA GTCGTACAAC
GCGCTCCTGG CGACCATGCG CTGGATGGGC TTCGACTGGG ACGAGGGCCC GGAGGTCGGC
GGCGCCTACG GCCCGTACCG GCAGTCCGAG CGCATGGGCA TCTACGCCGA CATCGCCGGC
AAGCTCCTGG ACGGCGGCCA CGCCTACCGC TGCTACTGCA CGCAGGAGGA ACTGGACGCG
GCCAACGAGA AGGCCAAGGC CGAGAAGCGC GCTCCGGGCT ACGCCGGCAC CTGCCGCGAC
CTCACGCCCG AGCAGATCGC CGCGCACGAG GCCGCCGGCC GTACCAGCGT CCTGCGTTTC
CGCATGCCCC AGGGCACGCT GACCTGGAAC GACCTGGTCC GCGGCGAGAT CTCCTTCGAC
ACCGCGAACG TGCCGGACTA CGTCCTGGTC CGCGCCGACG GCTCGCCGCT GTACACCCTG
GTGAACCCGG TCGACGACGC CCTGATGCGC ATCACGCACG TACTGCGCGG CGAGGACCTG
CTCTCCAGCA CCCCGCGCCA GCTGCCGCTG CACGCCGCAC TGATCGAGCT GGGACTGGCG
GAGACCGTAC CGGTCTTCGG GCACCTGCCC TACGTCATGG GCGAGGGCAA CAAGAAGCTG
TCGAAGCGGG ACCCGGAGGC GTCCTTCTCC TTCTATGTGA AGGAGGGCTA CCTGCCCGAG
GGACTGCTGA ACTACCTGGC GCTGCTCGGC TGGTCGCCAG GCGGGGACAA GGAGTTCTTC
TCCCCCCAGG AGATGTACGC GGCATTCGAC GGCTCGCGCA TCAACGCCAA CGCGGCCCGC
TTCGACCTGA AGAAGTGCCA GGCGATCAAC GGCGACCACG TCCGCGCCCT GGCACCGGAG
GACCTGGCCC AGCGCATCGT CCCCTTCCTG GCCGAGCAGG GCCTGGTCTC CGACCCGCCC
CAGCCCGACC AGGCCGCGAC CCTGGCCGCC GCCGTCCCCC TGATCCAGGA GCGCATGGTG
GTGCTGCGCG AATCGGTGGA CATGATCGGA TTCCTCTTCG TCCCCGAGCA CGCCTTCACC
GTCGACCCGG CCGACGCCGC CAAGGCCCTC ACCGAGGACG CCAAGCCGGT CCTAGAGGCC
GCCGCCAAGG CCCTCGAGGC ACTGCCGCAG TGGACGACCG CCGCAATCGA CGCCGCCCTC
CGCGAGACCC TGATCGACGG CCTCAGCCTG AAGCCCAAGA ACGCCTTCAC ACCAGTCCGC
GTCGCCATCA CCGGCCGCCG CATCTCACCC CCCCTGTTCG AGTCGATCGA GCTACTCGGC
CGCGACCGGA CGCTACGACG GCTGAACGCG GCCCTGAGCG CGTAA
 
Protein sequence
MLNTDKPVRV RFPPSPTGDP HVGMVRSALF NYAFARHYGG TFVFRIEDTD AARNTEESYN 
ALLATMRWMG FDWDEGPEVG GAYGPYRQSE RMGIYADIAG KLLDGGHAYR CYCTQEELDA
ANEKAKAEKR APGYAGTCRD LTPEQIAAHE AAGRTSVLRF RMPQGTLTWN DLVRGEISFD
TANVPDYVLV RADGSPLYTL VNPVDDALMR ITHVLRGEDL LSSTPRQLPL HAALIELGLA
ETVPVFGHLP YVMGEGNKKL SKRDPEASFS FYVKEGYLPE GLLNYLALLG WSPGGDKEFF
SPQEMYAAFD GSRINANAAR FDLKKCQAIN GDHVRALAPE DLAQRIVPFL AEQGLVSDPP
QPDQAATLAA AVPLIQERMV VLRESVDMIG FLFVPEHAFT VDPADAAKAL TEDAKPVLEA
AAKALEALPQ WTTAAIDAAL RETLIDGLSL KPKNAFTPVR VAITGRRISP PLFESIELLG
RDRTLRRLNA ALSA