| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_1265 |
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| Symbol | |
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| ID | 8332600 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 1433935 |
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| End bp | 1435509 |
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| Gene Length | 1575 bp |
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| Protein Length | 524 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644954412 |
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| Product | major facilitator superfamily MFS_1 |
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| Protein accession | YP_003112031 |
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| Protein GI | 256390467 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCAGCACT TCCCGACCGC TGTCACGGTG ACGACTGTGA CCTCTGTCTC CGAGCGCCCC
GATCCCGATG AGCGGGCTGA GGGGCATTCG AGCATTCCGG GGATCGCGGG GCTGTCCGAG
CGGCGGAAGA ATCAGGCGTT GGCGGTGTGC CTGCTCGTCG GGTTCATGAC GTTGCTGGAC
GTCTCGATCG TCAACGTGGC GTTGCCCTCG ATGCAGAAGG GTCTGTCGGC GACGCCTGCC
GACCTGTCGT GGGTGGTGTC CGGGTACGCG CTGACCTTCG GGCTGATCCT GGTGCCGGCT
GGGGTGTTCG GGGACATGGT CGGGCGGCGG ACCGCGTTCC TGGTCGGGTT GGCGGCGTTC
ACCGTCGCCT CCGGGTTGTG CGGGATCGCG CCGGGGGCGG GGTTCCTGGT GGTCGCGCGG
TTGGTGCAGG GGTTCGCTTC GGGGATTCTC GGGCCGCAGA TCTCCGGGCT GATCCAGGAG
ATGTTCAGCG GGGCGGCGCG GGCCCGGGCC TTCGGGTACT TCGGGGCGAC GGTGGGGTTG
GCGACGGCGG TCGGACCGCT GGTCGGCGGG CTGCTGATCG CCGCCGGCGG GGAGGAGCAC
GGCTGGCGCT GGGTGTTCTT CGTGAACCTG CCGATCGGGG TCATCGCCTT CGCGCTCGCG
CTGCGCCTCA TCCCGGGGTG CCTCGGCGCC GGGATGAGCA AGACGCGCGG GCGCATCGAC
TGGCTCGGCG TCGTCCTGCT CGGCGCGTCC GTGACCGCGA TCATGCTGCC GCTGGTGCAG
GAGCAGCAGT GGACGGGGCG CGGCAAGTGG TGGCTGGTGG TGCTCGGCGT GCTGCTGATC
ATCGCCTTCG CGCAGTGGGA GCGCCGGGTC GCGCGCTCCG GGCACACCCC GCTGGTCCCG
CCGGCTCTGG TCAGCATCCG CTCCTACACC CTCGGCAGCG TCCTCGGCCT GCTCTACTTC
GCCGGCTTCA CCACGATCTT CTTCATCTTC ACGCTCTACG TGCAGAACGG CCTGAACTAC
AGCGCCCTGG AAGCGGGCCT GGCCACCACG CCCTTCGCGA TCGGCTCCGC GGTCAGCGCC
ACCCTCGGCG GACGCCTGGT CGGCAAGCAC GGCCGCCCGC TGGTCATCCT CGGCATCATC
CTGGTGGGGC TGGGCACCGC GGCGGCGGTC CTGGTCGTGC ACTGGGTCCA CGGACGCGGC
GCGGGCATCG CCACCGCGGG CCCGCTGCTG ATCGCCGGCG TCGGCTCCGG ACTGGTCATC
GCCCCCAACC TCGCGCTGTC CCTGTCGGAG GTCCCGGTGA TGCGCGCCGG AACCGCCGGC
GGCGTCATGC AGACCGGGCA GCGCCTGGGG TCCGCGCTCG GCATCGCCTG CGTCGGCGCC
GTCTTCTTCT CCCGCGTCAG CCACGGAAAG GGCTTCGCCA ACGCCTTCCA GGCCGGCGCC
GTCGTCGCGA TCTGCTTCGA GGCCGCCGCT TTGGTGGTCG GGATCGCCGA CTGGCGCAGC
CGGAAGGCAG ACGCCTCCGA CGCCTCCGAC CCGCCCGAAG CCCTCGACGA CGCCCCCGAC
CCCGCCGCCG GCTGA
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| Protein sequence | MQHFPTAVTV TTVTSVSERP DPDERAEGHS SIPGIAGLSE RRKNQALAVC LLVGFMTLLD
VSIVNVALPS MQKGLSATPA DLSWVVSGYA LTFGLILVPA GVFGDMVGRR TAFLVGLAAF
TVASGLCGIA PGAGFLVVAR LVQGFASGIL GPQISGLIQE MFSGAARARA FGYFGATVGL
ATAVGPLVGG LLIAAGGEEH GWRWVFFVNL PIGVIAFALA LRLIPGCLGA GMSKTRGRID
WLGVVLLGAS VTAIMLPLVQ EQQWTGRGKW WLVVLGVLLI IAFAQWERRV ARSGHTPLVP
PALVSIRSYT LGSVLGLLYF AGFTTIFFIF TLYVQNGLNY SALEAGLATT PFAIGSAVSA
TLGGRLVGKH GRPLVILGII LVGLGTAAAV LVVHWVHGRG AGIATAGPLL IAGVGSGLVI
APNLALSLSE VPVMRAGTAG GVMQTGQRLG SALGIACVGA VFFSRVSHGK GFANAFQAGA
VVAICFEAAA LVVGIADWRS RKADASDASD PPEALDDAPD PAAG
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