| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_1183 |
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| Symbol | |
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| ID | 8332518 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 1333034 |
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| End bp | 1334233 |
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| Gene Length | 1200 bp |
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| Protein Length | 399 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 644954330 |
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| Product | ROK family protein |
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| Protein accession | YP_003111949 |
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| Protein GI | 256390385 |
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| COG category | [G] Carbohydrate transport and metabolism
[K] Transcription |
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| COG ID | [COG1940] Transcriptional regulator/sugar kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.159445 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGAGTCCG CCTGGAACCG GAGCGTTCTG CGCACCAACA ACGAGCGGCT CCTGCTGGAC
CGGCTGCGCG CCGACGGCGC CACCTCCCGC GCGGAGCTGG CCCGCCTGAC CGGCCTGTCC
AAGCCGACGG TGTCCACGGC CCTGGGCCGG CTGGAGCACG GCGGCCTGGT GCGCGAGATC
GGCAAGCAGG CGGTGGCCGG CCGCGGCCGC TCGCCGGTGC TCTACGAGGC CGACCCGACC
GCCGGCTACG CCATCGGCGT GGACGTCGGC CGCAGCTGGA TCCGCGTCGG CCTGGCCGAC
CTGGACGGCA CCGTCGTCGG CCGCAGCGAC CACCCCAATA CCGCCGCCGA CGCCGACGGC
ATCGTCGACG CGATCGGGGA GCAGGCCCGC CACGCCGCCC GCGAGGCCGG CGTGGCCTGG
GAGCGCGTCC TGCACGCCGT GGTCGGCAGC CCCGGCGTCA TCGACACCAC GACCAACGAA
CTGCGCTACG CCGCGAACCT GCCCGGCTGG GGACGCCGCG ACGTGACCGA CCGGCTGGCG
GCGTCCCTCG GGACAGGTCT GGAGGTCTTG AACGACGCCA ACCTCGCCGC CCTCGGCGAG
CACGCGGCAG GAGCGGGACG CGACCGGCGG CTGTTCGTCT ACCTGCTCAT CGGGACAGGA
CTCGGCTCCG GCATCGTGGC CGACGGGAAG CTGTTCCCCG GCGCGCACGG CGCGGCGGGC
GAGATCGGAT ACCTGCCGTA CGGGTCGTAC ACCGAGGACC GGGCCCGCAC CCGCGGACCG
CTGGAAGACG CCGCGGCGGC GGACTCGGTG GTGGCGACCG CACGCGAGCT GGGCATGGCC
GACGTGGGCT CGGCGAAGGA CGTCTTCCTC GCCGCGCGCG CGGGCAGCGC GACCGCCCTC
GAGGTGGTCA AGCGCGAAGC CGAACGCCTC GCGCACGCGG TCGCCTCGAT CGCCGCGGTG
ATCGACCCGG AACTCGTCGT CCTCGGCGGC GGCATCGGCG ACAGCGCGGA CCTCCTCCTG
GAGCCACTAC GCGAGACCCT CCACAAAATG ACGCCGCTCG TGCCGGAGCT GGCCGCATCA
CTCCTGGGCG CGAACGCGGT GCTCGAGGGC GCCCTGGCTT CCGGCGTGCG GACGGTGCGA
GGGCTGGTTT TCGAGGCCTG GCAGGGGGTT CAGGAGACGG TGCCGGCCAG CACTGCGTAG
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| Protein sequence | MESAWNRSVL RTNNERLLLD RLRADGATSR AELARLTGLS KPTVSTALGR LEHGGLVREI
GKQAVAGRGR SPVLYEADPT AGYAIGVDVG RSWIRVGLAD LDGTVVGRSD HPNTAADADG
IVDAIGEQAR HAAREAGVAW ERVLHAVVGS PGVIDTTTNE LRYAANLPGW GRRDVTDRLA
ASLGTGLEVL NDANLAALGE HAAGAGRDRR LFVYLLIGTG LGSGIVADGK LFPGAHGAAG
EIGYLPYGSY TEDRARTRGP LEDAAAADSV VATARELGMA DVGSAKDVFL AARAGSATAL
EVVKREAERL AHAVASIAAV IDPELVVLGG GIGDSADLLL EPLRETLHKM TPLVPELAAS
LLGANAVLEG ALASGVRTVR GLVFEAWQGV QETVPASTA
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