Gene Caci_1165 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_1165 
Symbol 
ID8332500 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp1309000 
End bp1311141 
Gene Length2142 bp 
Protein Length713 aa 
Translation table11 
GC content72% 
IMG OID644954313 
Productserine/threonine protein kinase 
Protein accessionYP_003111932 
Protein GI256390368 
COG category[K] Transcription
[L] Replication, recombination and repair
[R] General function prediction only
[T] Signal transduction mechanisms 
COG ID[COG0515] Serine/threonine protein kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGTGATT CTGGGGATTG GGGCGCGCCT GGATACACCG AGATCCGGGT GCTCGGGTCG 
GGAGCCACGG GGCGGGTCGT GCTCGCGCGG GAGGATGCGG GCGGGCGGTT GGTGGCGATC
AAGTACCTTG CCGCGCGGCT GGTGGGGGAC CCTGTGTTCG CCGAGCGCTT CCGGCGGGAG
GCTGAGCTCA TGGCGCTCGT GCGGGATCCG CATGTGGTCG AGGTGTTCGG GCTCGTGGTC
GCCGCGGACG GGCAGGGTGT CGCGCTGGTG ATGGAGGCGG TCGAGGGACC GACTCTGCGG
GCCCTGCTGG GACGCGGGCA CGGGTCGCCC GAGGCTGCGC TGGCGCTGCT GCGCGGGTCG
CTGCTGGGGC TGGCCGCGGC GCACGACCGG GGCGTGGTGC ACCGCGACTA CAAGCCGGAC
AACGTGCTGG TGGACGCCCA CGGCGAGAGC AAGCTGACGG ACTTCGGCAT CGCGTCGCCG
GCAGGGCAGG GCGTGCCGGC CGAGGGCACG CCGGCGTACA TGGCACCCGA GCAGTGGAAC
GGCTACCCGC CCGCGCCCGC GTCGGACATG TACTCGGCGG CGGTGGTGTT CTACGAATGC
CTGACCGGAA TCCGGCCCTT CCGCTCGGAG ACCCTGGCCG AGCTGCGAAC GCTGCACGAA
TCGGCGCCCC CACCGCTGGA CCAGGTCCCG CCGCCGGTAC GCGCACTGGT GGAGCGAGGA
CTCGCGAAGT ATCCAGGGCA ACGATACGGC GATGTGCGGA CCTTTCTGGC CGACGTCGAG
GCGGCGGCGC TCGCCGGGTA CGGAGCGGAC TGGCTCGAGC GCGGAGTCAG GGACCTGGGT
TACGTCGCCG CGGGGCTGAT CGCCGCGGTG CCGCTGCTGG CTTTGGCCGC GGGCGCGACG
GCGGGGACGG TGGGGGTCGC GGGAGCTGCG GGAGCTGCCG GAGCTGTGAC GGGAGCAGCT
GGAGCGGCCG GGGCAGCGGG CGTTGTCGGC GGCGCGGCGG GAGCGGCTGG GGCGGCTGGC
ACGGCAGCAA GTGCAGCCGG TGCGGCTGGG GCGGCAGGAA CTGCGGCGAG TGCAGCCAGC
GCGGCGAGCG CTGTCGGATC CGGTGCTGGG GCTGCGGGAG CCGGGACCGG GGCAGCTGGC
GCCGGAGCGG CAGGTGTCGG CCAGGCGGCC ACCCAAGCCG GCGTCCAAGG TGCGGTTCAA
GCTGGTCAGG CTGGTGGTCA AGCTGCCGGC CATGCCGCTA CTCAAGCCGC CGGTCACCTT
GGTGCGCAAG CCGCCGGGCA TGGTGCCGCT GCTCAAGCCT TCGGTGGTGC GGCGTCGGCT
CATGGGGCGG CGGCGCAGAC TTTCGGTGGG GTCGGGCATG CGGTGGCGGG TCATGCTGCT
GTTCATGGCT CCACTGCTGC CGGTCAAGTT CTTGGCGATG CCGGTGGGCA CGCCGCGCAG
GCCGCGCAGC ACACTCGGCG TGCCGCGCGC TGGACGCGGC ATGGGGCGAA GCTGCTGCAT
GGCAAGGCGC TCGCGGCGAC CGTTGCGACC GTCACCGTTG CGGCGGCGGG GACCGGGGTC
GTGGTGGCGG CGACGGGGAG TACTGATCCG AAGGCTGCGG TGGCGCAGGC GGAGGAGTCC
ACGTTGCGTG CGTTCGGGCG CGGCGATTTT CCCACGATGT GCGACAGCAT GAGTGCCGCG
TTGCTCAAGC TGTACTCCGG GACGCAGGGG TGCCTGAAGC TCATGGCCAG TGCCAATGGC
TTCGTGTCCG CTGCCGGCGC CTCGCTCGCC GACGAGCGCA AGGCCGCCAG TGCCGCGACC
GTCGATGCGT CGCAGGTCAC TGTCAACGGC GATACCGCGG TGGTGCCCGC GGCGGCGGTG
CACATCAAGT TCCCCGCCAT CACGATCATG GGGCAGACCG TGCCGTTCCG GATGAACGAC
GTCACCTGGG TCAAGGAGAA CGGCCGCTGG AGGATCGGCA TGCCCAAGAA CATGCCGAGC
GAGTTGCCGA CGCAGCTGTT TACCGGCGGC AGCATCCCGA CCGATTTGTT CCCGACCGAC
CTGCCGACTG ACTTCCCGAC CGATTTGTTC CCGACGGACC TGCCGACCGA CCTGCCCACG
GACCTGCCGA CCGATTTCCC CACGGACCTG CCCACCGGCT GA
 
Protein sequence
MSDSGDWGAP GYTEIRVLGS GATGRVVLAR EDAGGRLVAI KYLAARLVGD PVFAERFRRE 
AELMALVRDP HVVEVFGLVV AADGQGVALV MEAVEGPTLR ALLGRGHGSP EAALALLRGS
LLGLAAAHDR GVVHRDYKPD NVLVDAHGES KLTDFGIASP AGQGVPAEGT PAYMAPEQWN
GYPPAPASDM YSAAVVFYEC LTGIRPFRSE TLAELRTLHE SAPPPLDQVP PPVRALVERG
LAKYPGQRYG DVRTFLADVE AAALAGYGAD WLERGVRDLG YVAAGLIAAV PLLALAAGAT
AGTVGVAGAA GAAGAVTGAA GAAGAAGVVG GAAGAAGAAG TAASAAGAAG AAGTAASAAS
AASAVGSGAG AAGAGTGAAG AGAAGVGQAA TQAGVQGAVQ AGQAGGQAAG HAATQAAGHL
GAQAAGHGAA AQAFGGAASA HGAAAQTFGG VGHAVAGHAA VHGSTAAGQV LGDAGGHAAQ
AAQHTRRAAR WTRHGAKLLH GKALAATVAT VTVAAAGTGV VVAATGSTDP KAAVAQAEES
TLRAFGRGDF PTMCDSMSAA LLKLYSGTQG CLKLMASANG FVSAAGASLA DERKAASAAT
VDASQVTVNG DTAVVPAAAV HIKFPAITIM GQTVPFRMND VTWVKENGRW RIGMPKNMPS
ELPTQLFTGG SIPTDLFPTD LPTDFPTDLF PTDLPTDLPT DLPTDFPTDL PTG