Gene Caci_1155 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_1155 
Symbol 
ID8332490 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp1300004 
End bp1301194 
Gene Length1191 bp 
Protein Length396 aa 
Translation table11 
GC content71% 
IMG OID644954303 
Productacyl-CoA dehydrogenase domain protein 
Protein accessionYP_003111922 
Protein GI256390358 
COG category[I] Lipid transport and metabolism 
COG ID[COG1960] Acyl-CoA dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCAGCCAT TGAACACCCA GCACGACCTC GAGAACCGCA TTCACGACTT CCTCGCGACC 
CATGATCCCG GCGCCACGAG CAAGCTGGAC TTCCTGCGTG CCCGCTTCGA CGCCGGGCTT
GCCTGGCTGC ACTACCCGCC GGGTCTGGGC GGTCTGGGGC TGCCCCGGGA CCAGCAGCCG
ATCGCCGAGA AGGCCTTCGC CGCCGCCGGC GCGCCCGACA ACGAGCCCAG ACGCATCGGC
ATCGGGCTGG GCATGGCCGC GCCGACCATC CTCGGCTTCG GCAGCGAGGA GCAGAAGCAG
CGCTGGCTGC GGCCGCTGTG GTGCGGGGAG GAGGTCTGGT GCCAGCTGTT CTCCGAGCCC
GGCGCCGGAT CCGACCTCGC GGCCCTGGCC ACCCGCGCCG TGCGCGACGG CGACGACTGG
ATCGTCAGCG GCCAGAAAGT CTGGACGTCC ATGGCGCACG AGGCGCGCTG GGCGATCCTG
GTCACCCGCA CCGATCCGGA CGTGCCGAAG CACCAGGGCA TGACCTACTT CGTGCTGGAC
ATGACCGCCC CTGGCGTCGA GGTGCGCCCG CTGCGGCAGA TGACCGGCGA GGCGGAGTTC
AACGAGGTCT TCCTGACCGA CGTCCGCATC CCCGACAGCC AGCGCCTCGG CGCGGTCGGC
GAGGGGTGGA AGGTCGCGCA GACCACGCTG ATGAACGAGC GGGTCGCGAT CGGCGGCGGG
GCGTCGCCGC GCGAGTCCGG GATGATCGGC GTGCTGGCGC AGAGCTGGCG CGACAACGAG
AAACTGCGCG ATCCCTCGCT CCACGACCGG CTGCTGACCC TGTGGGTCGC CGCCGAGGCC
GCGCGCCTGA CCGCGCAGCG CCTGTCCGCG CAGCTCGCCG CCGGACAGCC CGGACCCGAG
GGTTCGGCGG CGAAGTACGC CTTCGCCACG CTCAACCAGC AGATCTCCGG TCTGGAGCTG
GAACTGCTCG GGGAGGAGGC GCTGCGCTAC GACGAGTGGA CGATGCGCCG CCCCGACACC
GTCGATTTCG TCGGCAGATC CCCCGGCTAC CGCTACCTGC GCGCCAAGGG CAACTCGATC
GAGGGCGGCA CCTCGGAGAT CCTGCTGAAC ATCATCGCCG AACGCGTTCT GGGCCTGCCC
GGGGAGATCC GGACGGACAA GGACGTCGCG TGGAAGGACC TCCCCCGGTG A
 
Protein sequence
MQPLNTQHDL ENRIHDFLAT HDPGATSKLD FLRARFDAGL AWLHYPPGLG GLGLPRDQQP 
IAEKAFAAAG APDNEPRRIG IGLGMAAPTI LGFGSEEQKQ RWLRPLWCGE EVWCQLFSEP
GAGSDLAALA TRAVRDGDDW IVSGQKVWTS MAHEARWAIL VTRTDPDVPK HQGMTYFVLD
MTAPGVEVRP LRQMTGEAEF NEVFLTDVRI PDSQRLGAVG EGWKVAQTTL MNERVAIGGG
ASPRESGMIG VLAQSWRDNE KLRDPSLHDR LLTLWVAAEA ARLTAQRLSA QLAAGQPGPE
GSAAKYAFAT LNQQISGLEL ELLGEEALRY DEWTMRRPDT VDFVGRSPGY RYLRAKGNSI
EGGTSEILLN IIAERVLGLP GEIRTDKDVA WKDLPR