Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_1155 |
Symbol | |
ID | 8332490 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 1300004 |
End bp | 1301194 |
Gene Length | 1191 bp |
Protein Length | 396 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 644954303 |
Product | acyl-CoA dehydrogenase domain protein |
Protein accession | YP_003111922 |
Protein GI | 256390358 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1960] Acyl-CoA dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 46 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCAGCCAT TGAACACCCA GCACGACCTC GAGAACCGCA TTCACGACTT CCTCGCGACC CATGATCCCG GCGCCACGAG CAAGCTGGAC TTCCTGCGTG CCCGCTTCGA CGCCGGGCTT GCCTGGCTGC ACTACCCGCC GGGTCTGGGC GGTCTGGGGC TGCCCCGGGA CCAGCAGCCG ATCGCCGAGA AGGCCTTCGC CGCCGCCGGC GCGCCCGACA ACGAGCCCAG ACGCATCGGC ATCGGGCTGG GCATGGCCGC GCCGACCATC CTCGGCTTCG GCAGCGAGGA GCAGAAGCAG CGCTGGCTGC GGCCGCTGTG GTGCGGGGAG GAGGTCTGGT GCCAGCTGTT CTCCGAGCCC GGCGCCGGAT CCGACCTCGC GGCCCTGGCC ACCCGCGCCG TGCGCGACGG CGACGACTGG ATCGTCAGCG GCCAGAAAGT CTGGACGTCC ATGGCGCACG AGGCGCGCTG GGCGATCCTG GTCACCCGCA CCGATCCGGA CGTGCCGAAG CACCAGGGCA TGACCTACTT CGTGCTGGAC ATGACCGCCC CTGGCGTCGA GGTGCGCCCG CTGCGGCAGA TGACCGGCGA GGCGGAGTTC AACGAGGTCT TCCTGACCGA CGTCCGCATC CCCGACAGCC AGCGCCTCGG CGCGGTCGGC GAGGGGTGGA AGGTCGCGCA GACCACGCTG ATGAACGAGC GGGTCGCGAT CGGCGGCGGG GCGTCGCCGC GCGAGTCCGG GATGATCGGC GTGCTGGCGC AGAGCTGGCG CGACAACGAG AAACTGCGCG ATCCCTCGCT CCACGACCGG CTGCTGACCC TGTGGGTCGC CGCCGAGGCC GCGCGCCTGA CCGCGCAGCG CCTGTCCGCG CAGCTCGCCG CCGGACAGCC CGGACCCGAG GGTTCGGCGG CGAAGTACGC CTTCGCCACG CTCAACCAGC AGATCTCCGG TCTGGAGCTG GAACTGCTCG GGGAGGAGGC GCTGCGCTAC GACGAGTGGA CGATGCGCCG CCCCGACACC GTCGATTTCG TCGGCAGATC CCCCGGCTAC CGCTACCTGC GCGCCAAGGG CAACTCGATC GAGGGCGGCA CCTCGGAGAT CCTGCTGAAC ATCATCGCCG AACGCGTTCT GGGCCTGCCC GGGGAGATCC GGACGGACAA GGACGTCGCG TGGAAGGACC TCCCCCGGTG A
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Protein sequence | MQPLNTQHDL ENRIHDFLAT HDPGATSKLD FLRARFDAGL AWLHYPPGLG GLGLPRDQQP IAEKAFAAAG APDNEPRRIG IGLGMAAPTI LGFGSEEQKQ RWLRPLWCGE EVWCQLFSEP GAGSDLAALA TRAVRDGDDW IVSGQKVWTS MAHEARWAIL VTRTDPDVPK HQGMTYFVLD MTAPGVEVRP LRQMTGEAEF NEVFLTDVRI PDSQRLGAVG EGWKVAQTTL MNERVAIGGG ASPRESGMIG VLAQSWRDNE KLRDPSLHDR LLTLWVAAEA ARLTAQRLSA QLAAGQPGPE GSAAKYAFAT LNQQISGLEL ELLGEEALRY DEWTMRRPDT VDFVGRSPGY RYLRAKGNSI EGGTSEILLN IIAERVLGLP GEIRTDKDVA WKDLPR
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