| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_1131 |
|---|
| Symbol | |
|---|
| ID | 8332466 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | - |
|---|
| Start bp | 1275776 |
|---|
| End bp | 1277119 |
|---|
| Gene Length | 1344 bp |
|---|
| Protein Length | 447 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 644954279 |
|---|
| Product | FAD linked oxidase domain protein |
|---|
| Protein accession | YP_003111898 |
|---|
| Protein GI | 256390334 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0277] FAD/FMN-containing dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTGCGA CCACGACCCT GGAAATCCTC AGCCGCGACT TCAGCGGCGA CATCATCGAG
CCGGGCCATG CCGAATACGC CGCGGCGTCC GGCGTGGTGC TGGCCGCGGG CGCGCCGGCC
GTCATCTTGC GGCCGAGCAG TGTCGGCGGA GTGCAGGCGG CGGTGCGCCA CGCCGCGGCG
TCCGGCCTGC CACTCGCAGT GCGAGGCGGC GGGCATTCGT TCGGCGGCTT CGGGACCAAC
GACGGCGGCG TCGTCATCGA TCTGAGCAGG CTCTGCGGCG TCGAGGTCGT CGCGGGCGGA
TGGAACGTCG TGCGCGTCGG GGGCGGCGCG ACGTGGGGAC AGGTGACGGC GGCGCTGAAG
CCGCACCGGC TCGCCCTGTC CTCCGGCGAC ACCAAGGGCG TCGGCGTCGG CGGCCTCACC
CTCGGCGGCG GCATCGGCTG GAAGGTGCGC AAGTACGGCC TGGCACTGGA CAGCCTGGTG
CGCGTGGAGA TCGTGACCGC CGACGGGCAC GTGGTCACCG CCGACGAAGA CGAGAACGCC
GACCTGTTCT GGGCCGTCCG GGGCGGCGGC GGGAACTTCG GCATCGTGAC CGCCTTCGAG
TTCGCCGGGC ATCCGACCAC TGACGTGTTC CACGGCAAGA TCTCGTTCCC CGGCGCCGAG
GCCGCGACCG TGATCCCCGC CTGGGCCGAG TACATGCGCA CCGCTCCCGA AGCCCTCACC
ACCATCGCCG TCTTCGCCAA CCCCTTCGCC GGACCCGGCG CCCCGGTCGA GATCCTCGTG
ACCTTCGACG GCGACGCCAC CGACGAAGCC GACGCCGCCA TCGACCCGCT CCGCCGCCTG
GGAACCCTGA TCGACGACGA CATCACCCTC AAGCCCTACG GCGACGTCCT CGAGGAAGCC
CCTCCCCTGC CCCCGGCACT CCGCTTCCAC ACCCGCAACG CCTTCGTTGA GCGCGCCGGC
GTGGACGCCG CGCTCCGCAT CATGACCGAG GCCGGCGCCG CCCCGGGCGC CCCGTTCCTC
ACCGCGCGCA GCCTCGGCGG CGCCCTGGCC CGCGTCCCCG ACGACGCGAC CGCCTTCGCC
CACCGCCGCG CCGAGCTGAT GATCGGCACC GCCCTGGTCG GCCCAGAGCC GGTGATCGAA
GCCGCGATAC CGGCCCTCGA CGCCCTCTGG GAACGCCTGA CACCGCACGT CAACGGCACC
TACCCGAACT TCAACACCAC CGCCACCGAT CAGGAGATCG CCGCCGCCTA CCCCACCGAC
ACCTACAAGC GCCTGGCCGC CGTCAAGCGC CACTACGACC CCGCGAACCT GTTCACCGCG
AACTACAACG TGCTGCCGCT GTAG
|
|---|
| Protein sequence | MTATTTLEIL SRDFSGDIIE PGHAEYAAAS GVVLAAGAPA VILRPSSVGG VQAAVRHAAA
SGLPLAVRGG GHSFGGFGTN DGGVVIDLSR LCGVEVVAGG WNVVRVGGGA TWGQVTAALK
PHRLALSSGD TKGVGVGGLT LGGGIGWKVR KYGLALDSLV RVEIVTADGH VVTADEDENA
DLFWAVRGGG GNFGIVTAFE FAGHPTTDVF HGKISFPGAE AATVIPAWAE YMRTAPEALT
TIAVFANPFA GPGAPVEILV TFDGDATDEA DAAIDPLRRL GTLIDDDITL KPYGDVLEEA
PPLPPALRFH TRNAFVERAG VDAALRIMTE AGAAPGAPFL TARSLGGALA RVPDDATAFA
HRRAELMIGT ALVGPEPVIE AAIPALDALW ERLTPHVNGT YPNFNTTATD QEIAAAYPTD
TYKRLAAVKR HYDPANLFTA NYNVLPL
|
|---|
| |