Gene Caci_1111 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_1111 
Symbol 
ID8332446 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp1254924 
End bp1255595 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content74% 
IMG OID644954259 
Productputative transcriptional regulator 
Protein accessionYP_003111878 
Protein GI256390314 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0673626 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCGACG TCGCCGTGAT CGCCGAACCC GCCGCCGCGG AGGCCTCCCT GGACCCGATC 
CGGTCCCGGA TCCTCGCCGC CCTGGCCGAA CCCGGATCGG CCGCCATGCT GGCGGGCCGC
CTGGGGCTGC CGCGCCAGAA GATCAACTAC CACCTGAAGG AACTCGAACG GCACTCCCTG
GTCGAGCTCG TCGAGGAACG CCGCAAGGGC AACGTCACCG AGCGGATCTA CGGCGCGACC
GCCGCCGCCT ACGTGATCTC CCCCAGCACC ATGGGCGCCG TCAGCCCGGA CCCCGACCGG
TCCCCCGACC GGCTGTCCGC GCGCTGGCTG CTGGCGCTGG GCTCACGGCT GATCCAGGAG
GTCGGCACGC TGCTGACCGG CTCGGCACGC GCCGGGAAGC CCGTCGCCAC CTACGCGATG
GACGCGCAGG TCCGCTTCGC CTCCGCCGCC GACCGCGCCG CGTTCGCCGA GGAGCTGACG
CAAGCCGTGA CCGCCCTGGT CAGCCGCTAC CACGACGAGC ACGCCCCGCA CGGCCGGGAC
CACCGGCTGG TCGTCGGACT CCACCCGATC CCGACGGCAC CGCCCACTCC AACCACCCCG
ACCGGACCAC AGCCGGCTGC CGAGACCGCG CCGCTGCCCG AGCCTGAAGC AGGACAGGAG
GACCCGCGAT GA
 
Protein sequence
MLDVAVIAEP AAAEASLDPI RSRILAALAE PGSAAMLAGR LGLPRQKINY HLKELERHSL 
VELVEERRKG NVTERIYGAT AAAYVISPST MGAVSPDPDR SPDRLSARWL LALGSRLIQE
VGTLLTGSAR AGKPVATYAM DAQVRFASAA DRAAFAEELT QAVTALVSRY HDEHAPHGRD
HRLVVGLHPI PTAPPTPTTP TGPQPAAETA PLPEPEAGQE DPR