Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_1111 |
Symbol | |
ID | 8332446 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 1254924 |
End bp | 1255595 |
Gene Length | 672 bp |
Protein Length | 223 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 644954259 |
Product | putative transcriptional regulator |
Protein accession | YP_003111878 |
Protein GI | 256390314 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0673626 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTCGACG TCGCCGTGAT CGCCGAACCC GCCGCCGCGG AGGCCTCCCT GGACCCGATC CGGTCCCGGA TCCTCGCCGC CCTGGCCGAA CCCGGATCGG CCGCCATGCT GGCGGGCCGC CTGGGGCTGC CGCGCCAGAA GATCAACTAC CACCTGAAGG AACTCGAACG GCACTCCCTG GTCGAGCTCG TCGAGGAACG CCGCAAGGGC AACGTCACCG AGCGGATCTA CGGCGCGACC GCCGCCGCCT ACGTGATCTC CCCCAGCACC ATGGGCGCCG TCAGCCCGGA CCCCGACCGG TCCCCCGACC GGCTGTCCGC GCGCTGGCTG CTGGCGCTGG GCTCACGGCT GATCCAGGAG GTCGGCACGC TGCTGACCGG CTCGGCACGC GCCGGGAAGC CCGTCGCCAC CTACGCGATG GACGCGCAGG TCCGCTTCGC CTCCGCCGCC GACCGCGCCG CGTTCGCCGA GGAGCTGACG CAAGCCGTGA CCGCCCTGGT CAGCCGCTAC CACGACGAGC ACGCCCCGCA CGGCCGGGAC CACCGGCTGG TCGTCGGACT CCACCCGATC CCGACGGCAC CGCCCACTCC AACCACCCCG ACCGGACCAC AGCCGGCTGC CGAGACCGCG CCGCTGCCCG AGCCTGAAGC AGGACAGGAG GACCCGCGAT GA
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Protein sequence | MLDVAVIAEP AAAEASLDPI RSRILAALAE PGSAAMLAGR LGLPRQKINY HLKELERHSL VELVEERRKG NVTERIYGAT AAAYVISPST MGAVSPDPDR SPDRLSARWL LALGSRLIQE VGTLLTGSAR AGKPVATYAM DAQVRFASAA DRAAFAEELT QAVTALVSRY HDEHAPHGRD HRLVVGLHPI PTAPPTPTTP TGPQPAAETA PLPEPEAGQE DPR
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