| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_1107 |
|---|
| Symbol | |
|---|
| ID | 8332442 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | - |
|---|
| Start bp | 1251316 |
|---|
| End bp | 1252368 |
|---|
| Gene Length | 1053 bp |
|---|
| Protein Length | 350 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 644954255 |
|---|
| Product | oxidoreductase domain protein |
|---|
| Protein accession | YP_003111874 |
|---|
| Protein GI | 256390310 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0673] Predicted dehydrogenases and related proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGCTT CCGAGAACCC GCTGCGCGTC GGCCTGATCG GCTACGGCCT CGCCGGGCGC
GCCTTCCACG CGCCGCTGAT CGCCACGACG CCGGGCATGC GGCTGCAGAA CGTGGTGACC
GCCGACGCCG AACGGCGCGA ACAGCTGAGC CGCGAGTACC CGGAGGCGCG CGCCGTCGAC
AGCGTCGAGC AGCTGCTCGC CGATCCCTCG GCGCTCGACG TCGTGGTCGT CGCCTCCCCC
AACGACACGC ACAGCCCGTC CGCGCGCGCC GCGCTGGAGG CGGGACTGCC GGTCGTGGTC
GACAAGCCGC TCGCCCCGAC CGCCGCCGAG GCCCGCGCAC TGATCGAGCT CGCCGAGGCG
CGCGGTGTGA TGCTGACCGT CTTCCAGAAC CGGCGCTGGG ACAGCGACTT CCGCACCGCG
AAGCACCTGA TCGCGGACGG CGCGCTGGGC GACGTGCACC GCTATGAATC CCGTTTCGAG
CGCTGGCGTC CGCAGGTCGC CACCGGCTGG CGCGAGTCGG CGGACCCGGC CAAGGCCGGC
GGCGTCCTCA ACGACCTCGG CAGCCATCTG GTCGACCAGG CGCTGCACCT GTTCGGTCCG
GCCGACCGCG TCTACGCCGA GGTCAACGTC CGGCGCCCCG GCGCGGCTGT CGACGACGAC
GCTTTCGTCG CGCTGACCCA CGCCTCCGGC GTCCACTCGC ATCTGTGGAT GAGCGCCGTG
GCCGCGCAAC CCGGACCGCG CCTGCGGATT CTCGGCAATC AGAGTGCGTA CTCGGTCCAG
GGCCTGGACC CGCAGGAGGC GGCACTGCGC GCCGGCGAGC GTCCCGGACC CGGCTGGGGC
GAGCCGGCCG ACAGCGATTG GGGACTGCTC GGCGCGACCG AGGACGCGCG GCGGTATCCG
TCGCTGCCGG GTGACTATCC CGCCTTCTAC GCCGGCGTCG TCGCGGCGCT GCGCGACGGC
GCGCCGGCTC CCGTCGATCC CCGCGACGCG CTGGCCACGC TCGAGGTCCT GGAACGCGCC
CGACGCTCGG CTGCGGAGGG CAGGACCCTG TAA
|
|---|
| Protein sequence | MSASENPLRV GLIGYGLAGR AFHAPLIATT PGMRLQNVVT ADAERREQLS REYPEARAVD
SVEQLLADPS ALDVVVVASP NDTHSPSARA ALEAGLPVVV DKPLAPTAAE ARALIELAEA
RGVMLTVFQN RRWDSDFRTA KHLIADGALG DVHRYESRFE RWRPQVATGW RESADPAKAG
GVLNDLGSHL VDQALHLFGP ADRVYAEVNV RRPGAAVDDD AFVALTHASG VHSHLWMSAV
AAQPGPRLRI LGNQSAYSVQ GLDPQEAALR AGERPGPGWG EPADSDWGLL GATEDARRYP
SLPGDYPAFY AGVVAALRDG APAPVDPRDA LATLEVLERA RRSAAEGRTL
|
|---|
| |