| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_1016 |
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| Symbol | |
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| ID | 8332350 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 1155935 |
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| End bp | 1156909 |
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| Gene Length | 975 bp |
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| Protein Length | 324 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644954165 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_003111785 |
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| Protein GI | 256390221 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.010862 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGCAGT GGAGTCCGGA GGAAATGCCG GATCTGACGG GGCGAGTCGC CATGGTCACG
GGGGCCAGCA GCGGAATCGG GTTCCACACA GCGTTGGAAC TCGCGCGTCA CGGAGCCCGG
ACCCTGCTCG CCGTCCGTGA TCCGAGCAGG GGAGAGTACG CGCGCGAGCG GATCACCGCG
GTGGTCCCCT CCGCGCGCGG CCTCGTCGAG ATCGTCGCGG TCGACCTGGC CAGCCTGGAA
TCGATCGAGG ACGCCGCCGC CGACCTGGCC GACCGCACGG CGGCGGTGGA CATCCTGGTG
AACAACGCAG GGGTGATGGT GCCCGACGGC CACACCACCT CCGACGGCTT CGAGCTCCAG
TTCGGGACCA ACCACCTGGG GCACTTCGCC CTCACCGGCC GGGTGCTCCC GCTGCTGCTG
GCCGCGGAGT CCGCGCGGGT CGTCACGATT TCCAGCCTCA CGCACCGCCG CGCCCGGCCG
TTCTGGGACT TCGAACCGGC GACGGCGAAC TCCAAGGAGT CCTATACCGA AGCCGAGTGG
CACCGGCACC GGGTCTCCGC TTATGGCCGC TCCAAGCTCG CCAACCTGCT CTTCGCCAAG
GAGTTGGACC GCAAAGCGAA GCAGGCGCGG TTCCCCCTTG CGAGCATCGC CGCGCACCCC
GGCTATACGG CTACCGGGCT GTTCGCCAAG ACCTCCTTCA GCCGGCGCAA CCGTGTCGTG
TCCGGACTGT CCCACATGGT TACTTGGGCT ACCGGTCAGA GTGCGGCCAC AGGTGCGTGG
CCCTCCTTAT ACGCGGCTAC TCATGTAGAC CTCTTCGGCG GCGAGTACAT CGGTCCGCGC
GGACCCGGGG AGATGCGTGG CGCACCTACG CGGGCCGTCA TGAGTGCGAT CGCGCAGGAC
GAGACCGTGG CCGCCATCTT GTGGGATCAG TCCGTCGCCG CCACCGGAGT GGGGTACGAG
GAGCTGTCCC GCTAA
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| Protein sequence | MPQWSPEEMP DLTGRVAMVT GASSGIGFHT ALELARHGAR TLLAVRDPSR GEYARERITA
VVPSARGLVE IVAVDLASLE SIEDAAADLA DRTAAVDILV NNAGVMVPDG HTTSDGFELQ
FGTNHLGHFA LTGRVLPLLL AAESARVVTI SSLTHRRARP FWDFEPATAN SKESYTEAEW
HRHRVSAYGR SKLANLLFAK ELDRKAKQAR FPLASIAAHP GYTATGLFAK TSFSRRNRVV
SGLSHMVTWA TGQSAATGAW PSLYAATHVD LFGGEYIGPR GPGEMRGAPT RAVMSAIAQD
ETVAAILWDQ SVAATGVGYE ELSR
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