Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_0992 |
Symbol | |
ID | 8332326 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 1132449 |
End bp | 1133171 |
Gene Length | 723 bp |
Protein Length | 240 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 644954141 |
Product | glycosyl transferase family 2 |
Protein accession | YP_003111761 |
Protein GI | 256390197 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0463] Glycosyltransferases involved in cell wall biogenesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.861872 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.00252858 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGCAGACAA CGGAGGCTCC CGGTGCGGCT GGGACTTCGG AGTTCGACGA CGTCTGGGTG GTCATCCCCG TCTACAACGA GGGCTCGGTG ATCGCCGAGG TCGTCGCGGG CGTGCTGCCG ACGTTCCCGA ACGTGGTGTG CGTGGACGAC GGCTCGCGCG ACGACTCCGC CGACCACATC GTCGCCACCG CCGCGCACCT GGTCAGCCAT CCGGTGAACC TCGGCCAGGG CGCCGCGCTG CAGACCGGTC TGGAGTACGC CCTGCTGCAG GACGGCTCGG AGTACTTCGT CACCTTCGAC GCCGACGGCC AGCACCGCGT GGAGGACGCC GCCGAGCTGG TACGCGCGGT CCGCGACGGC GGCGCCGACG TCGCCCTGGG CTCCCGCTTC CTAACCGGCA CCGCCCACGT GCCCTGGCTC CGGCGCGCGA TGCTGAAGAC CGTCGCCGCG CTCAGCCCCG CGGCCCGCCG CCTGCAGCTC ACCGACGCGC ACAACGGCCT GCGCGTCCTG AACCGCGCCG CCGCCTCCCA GCTGAAGATC ACCATGAACG GCATGGCGCA CGCCTCGGAG ATCGTGGACT ACCTGGCGCG CTCGGAGCTG GCGGTCACCG AGGTCCCGGT GACCGTGCTC TACACCGACT ACTCCAAGGC CAAGGGCCAG TCCCTGATCA ACGGCGTCAA CATCCTGTTC GACCTCTCCC TGCGATCGCG GAGGACGCCA TGA
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Protein sequence | MQTTEAPGAA GTSEFDDVWV VIPVYNEGSV IAEVVAGVLP TFPNVVCVDD GSRDDSADHI VATAAHLVSH PVNLGQGAAL QTGLEYALLQ DGSEYFVTFD ADGQHRVEDA AELVRAVRDG GADVALGSRF LTGTAHVPWL RRAMLKTVAA LSPAARRLQL TDAHNGLRVL NRAAASQLKI TMNGMAHASE IVDYLARSEL AVTEVPVTVL YTDYSKAKGQ SLINGVNILF DLSLRSRRTP
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