Gene Caci_0992 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_0992 
Symbol 
ID8332326 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp1132449 
End bp1133171 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content71% 
IMG OID644954141 
Productglycosyl transferase family 2 
Protein accessionYP_003111761 
Protein GI256390197 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0463] Glycosyltransferases involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.861872 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.00252858 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGCAGACAA CGGAGGCTCC CGGTGCGGCT GGGACTTCGG AGTTCGACGA CGTCTGGGTG 
GTCATCCCCG TCTACAACGA GGGCTCGGTG ATCGCCGAGG TCGTCGCGGG CGTGCTGCCG
ACGTTCCCGA ACGTGGTGTG CGTGGACGAC GGCTCGCGCG ACGACTCCGC CGACCACATC
GTCGCCACCG CCGCGCACCT GGTCAGCCAT CCGGTGAACC TCGGCCAGGG CGCCGCGCTG
CAGACCGGTC TGGAGTACGC CCTGCTGCAG GACGGCTCGG AGTACTTCGT CACCTTCGAC
GCCGACGGCC AGCACCGCGT GGAGGACGCC GCCGAGCTGG TACGCGCGGT CCGCGACGGC
GGCGCCGACG TCGCCCTGGG CTCCCGCTTC CTAACCGGCA CCGCCCACGT GCCCTGGCTC
CGGCGCGCGA TGCTGAAGAC CGTCGCCGCG CTCAGCCCCG CGGCCCGCCG CCTGCAGCTC
ACCGACGCGC ACAACGGCCT GCGCGTCCTG AACCGCGCCG CCGCCTCCCA GCTGAAGATC
ACCATGAACG GCATGGCGCA CGCCTCGGAG ATCGTGGACT ACCTGGCGCG CTCGGAGCTG
GCGGTCACCG AGGTCCCGGT GACCGTGCTC TACACCGACT ACTCCAAGGC CAAGGGCCAG
TCCCTGATCA ACGGCGTCAA CATCCTGTTC GACCTCTCCC TGCGATCGCG GAGGACGCCA
TGA
 
Protein sequence
MQTTEAPGAA GTSEFDDVWV VIPVYNEGSV IAEVVAGVLP TFPNVVCVDD GSRDDSADHI 
VATAAHLVSH PVNLGQGAAL QTGLEYALLQ DGSEYFVTFD ADGQHRVEDA AELVRAVRDG
GADVALGSRF LTGTAHVPWL RRAMLKTVAA LSPAARRLQL TDAHNGLRVL NRAAASQLKI
TMNGMAHASE IVDYLARSEL AVTEVPVTVL YTDYSKAKGQ SLINGVNILF DLSLRSRRTP