Gene Caci_0974 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_0974 
Symbol 
ID8332308 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp1112347 
End bp1113666 
Gene Length1320 bp 
Protein Length439 aa 
Translation table11 
GC content69% 
IMG OID644954126 
Productdiphosphate--fructose-6-phosphate 1-phosphotransferase 
Protein accessionYP_003111746 
Protein GI256390182 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0205] 6-phosphofructokinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.0160725 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACACGG CCGATCTTCT CACCATCACT TCCGATGATC TGGCCATCAC GCGCCTGGGC 
GAGCGCACTG TGGACACCCC GCTCTCGGAC CTGCTCGGGG AGCGGCAGGA GACGTGGCAC
TACGTCACCG AGACCGACCG GGTCATGCTG GACGTCGTGC AGGGCATCGC GAACAAGCGC
GACGTGGACG TGGCGGGCCT GCCCGCCTTC AACCCCGGCG GTCCGCGCCG CAAGCTGTTC
TTCGAGCCCT CCGAGGTCAC CGCCGCCATC GTCACCTGCG GCGGCCTGTG CCCCGGCCTG
AACAACGTGA TCCGCGGCCT GGTCCTGCAC CTCGGGCGCG CCTACGGCGT CAAGCGCGTC
CTGGGCTTCC GCAACGGCTT CAAGGGCCTC ACCGACGGCT CCGAGCCGAT GGAGCTCACC
GAGCAGTCGG TCGCCGACAT CCAGAACCGC GGCGGCACGA TACTCGGCAC CTCCCGCGGC
AACCAGGACC CGGTGGTCGC CGTGGACTCG ATGGTCCGCC TCGGCGTCAA CATCCTGTTC
GTCATCGGCG GCGACGGCAC CCTGCGCGGC GCCTCGAAGC TCGCCGACGA GGCCCGAGCC
CGCGGCGAGC GCATCGCGGT GGTCGGCATC CCCAAGACCA TCGACAACGA CATCCCCTGG
ATCGACCGCT CCTTCGGCTT CCACACCGCC TTCGCCCAGG CCGCGCAGTC CATCCGCGCC
GCGCACATAG AGGCCTCCTC GACCGAGAAC GGCGTCGGCC TGGTGAAGCT GATGGGCCGG
CACAGCGGCT TCATCGCCTG CTACTCGACC CTCGCCAGCC ACGACGTGGA CTTCACCCTG
ATCCCCGAGG TCCCCTTCGA CGTGGACGTC CTGATGTCCC GCCTGAAGAA GAAGGTCGAA
GCCCAGGGGC ACGCGGTGGT CGTCGTCGCA GAGGGTGCGG GCCAGGAGCA CTTCCCGGCA
TCAGACCAGA CCGACGCATC CGGGAACGCC AAGCTGAACG ACATAGGCGC CCTGCTGAAG
AAGCGGATCA TCGACGCCTT CGGCGACGAG CCACTGTCGG TACGCTACGT CGACCCCGGC
TACGAAATCC GCTCGGTGCC AGCCAACGCC TTCGACGCGG TCTACTGCAC GCGGCTGGCG
CAGGCGGCGA CCCACGCGGG CATGGCCGGC TTCACCTCGA TGGTGGTCGG CCAGTGGAGC
GGACGCATGG TCCACCTGCC GATCGCCCTG GCCACGGCGA GCCGGAACGT GGTCGATCCG
CACGGGCAGC TGTGGATGAA CGTGCTGGAG ACGACGGGGC AGCCGAAGCA GATGCTGTAG
 
Protein sequence
MNTADLLTIT SDDLAITRLG ERTVDTPLSD LLGERQETWH YVTETDRVML DVVQGIANKR 
DVDVAGLPAF NPGGPRRKLF FEPSEVTAAI VTCGGLCPGL NNVIRGLVLH LGRAYGVKRV
LGFRNGFKGL TDGSEPMELT EQSVADIQNR GGTILGTSRG NQDPVVAVDS MVRLGVNILF
VIGGDGTLRG ASKLADEARA RGERIAVVGI PKTIDNDIPW IDRSFGFHTA FAQAAQSIRA
AHIEASSTEN GVGLVKLMGR HSGFIACYST LASHDVDFTL IPEVPFDVDV LMSRLKKKVE
AQGHAVVVVA EGAGQEHFPA SDQTDASGNA KLNDIGALLK KRIIDAFGDE PLSVRYVDPG
YEIRSVPANA FDAVYCTRLA QAATHAGMAG FTSMVVGQWS GRMVHLPIAL ATASRNVVDP
HGQLWMNVLE TTGQPKQML