Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_0946 |
Symbol | rplF |
ID | 8332280 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 1089131 |
End bp | 1089673 |
Gene Length | 543 bp |
Protein Length | 180 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 644954099 |
Product | 50S ribosomal protein L6 |
Protein accession | YP_003111719 |
Protein GI | 256390155 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0097] Ribosomal protein L6P/L9E |
TIGRFAM ID | [TIGR03654] ribosomal protein L6, bacterial type |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.183711 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTCGTA TTGGACGGCT GCCGATCCCG GTTCCCACCG GCGTCGACGT CACCATCAAC GGCCAGGACG TGACCGTCAA GGGTCCAAAG GGCACCTTGT CGCACACGGT CGTCAACCCG ATCACGATCG AGAAGGGCGA GGACGGCAAC CTGGTCGTCT CGCGCCCGAA CGACGAGCGG ATCGCCAAGG AGCGCCACGG TCTGTCGCGC ACCCTGGTCA ACAACATGAT CATCGGCGTG ACCCAGGGCT ACACCAAGAG CCTGGAGATC TCCGGTGTCG GTTACCGCGT GACCGCCAAG GGCTCGGACC TGGAGTTCGC CCTCGGCTAC AGCCACCCGG TTCCGGTTCC GGCGCCCGCC GGCATCACCT TCGCCGTGGA GAGCCCCACC CGGTTCTCCG TGTCCGGGAT CGACAAGCAG CTGGTGGGCG AGACCTGCGC CTACATCAAG AAGCTGCGCA AGATCGACCC GTACAAGGGC AAGGGCATCA AGTTCACCGG CGAGGTCATC CGCCGGAAGG CCGGAAAGGC TGGGAAGAAG TAA
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Protein sequence | MSRIGRLPIP VPTGVDVTIN GQDVTVKGPK GTLSHTVVNP ITIEKGEDGN LVVSRPNDER IAKERHGLSR TLVNNMIIGV TQGYTKSLEI SGVGYRVTAK GSDLEFALGY SHPVPVPAPA GITFAVESPT RFSVSGIDKQ LVGETCAYIK KLRKIDPYKG KGIKFTGEVI RRKAGKAGKK
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