| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_0937 |
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| Symbol | rpsC |
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| ID | 8332271 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 1085217 |
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| End bp | 1086095 |
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| Gene Length | 879 bp |
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| Protein Length | 292 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644954090 |
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| Product | 30S ribosomal protein S3 |
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| Protein accession | YP_003111710 |
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| Protein GI | 256390146 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0092] Ribosomal protein S3 |
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| TIGRFAM ID | [TIGR01009] ribosomal protein S3, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0855011 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGGCCAGA AGGTTAACCC GCATGGGTTC CGCCTCGGCA TCACCACGGA CTTCAAGTCC
CGGTGGTACG CCGACAAGCT GTACAAGGAC TACGTCAAGG AAGACGTCGC GATCCGTCGC
CTCATGACCG AGGGCATGGA CCGCGCGGGC ATCAGCAAGG TGGAGATCGA GCGCACGCGC
GACCGCGTCC GCGTCGACAT CCACACCGCT CGCCCGGGCA TCGTCATCGG CCGCCGCGGC
GCCGAGGCCG ACCGCATCCG CGGCAAGCTC GAGAAGCTGA CCGCCAAGCA GGTCCAGCTG
AACATCCTCG AGGTGCGCAA CCCCGAGAGC GACGCTCAGC TGGTCGCGCA GGGCATCGCC
GAGCAGCTGG CGCAGCGTGT GGCCTTCCGC CGCGCGATGC GCAAGGCGAT CCAGTCCTCC
ATGAAGGCCG GCGTCAAGGG CATCAAGGTC CAGGTCTCCG GTCGTCTGGG CGGCGCTGAG
ATGAGCCGCT CGGAGCAGTA CCGCGAGGGC CGCGTGCCCC TGCACACGCT GCGCGCGAAC
ATCGACTACG GCTTCTACGA GGCCAAGACC ACCTTCGGCC GCATCGGCGT GAAGGTCTGG
ATCTACAAGG GCGATGTCAC CTCGCTGTCG GCTCAGCGCG CGCTGAACGC CGCCGAGGCC
CGTGCCGGAC GTCCGGCCCG CGACGGCGAC CGCCGTGGCG GCGGCCGTGA CGGCGGCGGC
CGTCCCCCGC GCCGCGACGG CGGCGGTGGC CGCGGTCCGC GTCGCGACGG CGGCGGCGGC
CAGCAGTCCC AGGCTCCGGC TCAGGCTCCG GCCGCCACCG AGGCGCCGGC TCCGGCCAGT
GCCGAGACTG TGTCTGATTC AAAGTCTAAG GAGGCGTGA
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| Protein sequence | MGQKVNPHGF RLGITTDFKS RWYADKLYKD YVKEDVAIRR LMTEGMDRAG ISKVEIERTR
DRVRVDIHTA RPGIVIGRRG AEADRIRGKL EKLTAKQVQL NILEVRNPES DAQLVAQGIA
EQLAQRVAFR RAMRKAIQSS MKAGVKGIKV QVSGRLGGAE MSRSEQYREG RVPLHTLRAN
IDYGFYEAKT TFGRIGVKVW IYKGDVTSLS AQRALNAAEA RAGRPARDGD RRGGGRDGGG
RPPRRDGGGG RGPRRDGGGG QQSQAPAQAP AATEAPAPAS AETVSDSKSK EA
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