| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_0930 |
|---|
| Symbol | rpsJ |
|---|
| ID | 8332264 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | + |
|---|
| Start bp | 1081674 |
|---|
| End bp | 1081982 |
|---|
| Gene Length | 309 bp |
|---|
| Protein Length | 102 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 644954083 |
|---|
| Product | 30S ribosomal protein S10 |
|---|
| Protein accession | YP_003111703 |
|---|
| Protein GI | 256390139 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0051] Ribosomal protein S10 |
|---|
| TIGRFAM ID | [TIGR01049] ribosomal protein S10, bacterial/organelle |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.243784 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGGGAC AGAAGATCCG CATCAGGCTC AAGGCCTACG ACCACGAGGT GATCGACTCC
TCGGCGAAGA AGATCGTCGA GACCGTGATC CGTACTGGCG CGCAGGTCGC CGGCCCGGTG
CCGCTGCCGA CTGAGAAGAA CGTGTACTGC GTCATCCGCT CGCCGCACAA GTACAAGGAC
TCGCGCGAGC ACTTCGAGAT GCGCACGCAC AAGCGACTCA TCGACATCCT CGACCCGACC
CCGAAGACGG TTGACTCGCT GATGCGTCTC GACCTGCCGG CGGGCGTCGA CATCGAGATC
AAGCTCTAG
|
|---|
| Protein sequence | MAGQKIRIRL KAYDHEVIDS SAKKIVETVI RTGAQVAGPV PLPTEKNVYC VIRSPHKYKD
SREHFEMRTH KRLIDILDPT PKTVDSLMRL DLPAGVDIEI KL
|
|---|
| |