Gene Caci_0923 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_0923 
Symbol 
ID8332257 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp1074274 
End bp1076391 
Gene Length2118 bp 
Protein Length705 aa 
Translation table11 
GC content67% 
IMG OID644954076 
Productelongation factor G 
Protein accessionYP_003111696 
Protein GI256390132 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0480] Translation elongation factors (GTPases) 
TIGRFAM ID[TIGR00231] small GTP-binding protein domain
[TIGR00484] translation elongation factor EF-G 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.345609 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCCCCA ACGCCGTTGA CCTGGCCAAG GTCCGCAACA TCGGGATCAT GGCCCACATC 
GACGCGGGCA AGACCACGAC GACCGAGCGC ATCCTGTACT ACACCGGGAT GAGCTACAAG
ATCGGCGAGG TCCACGACGG CGCTGCCACC ACCGACTGGA TGGAGCAGGA GCAGGAGCGT
GGCATCACGA TCACCTCCGC GGCCGTCACC TGTCACTGGT CGGTGGACGA CGTCGACAAC
ACCATCAACA TCATCGACAC GCCCGGACAC GTCGACTTCA CCGTCGAAGT GGAGCGCTCC
TTGCGCGTTC TCGACGGCGC GGTCGCGGTG TTCGACGGTG TCGCCGGCGT GGAGCCGCAG
TCCGAGACGG TCTGGCGTCA GGCCGACCGT TACGGCGTCC CGCGCATTTG CTTCATCAAC
AAGCTGGACC GCACCGGCGC GGAGTTCCAC CGCTGCGTCG AGATGATCGT CACCCGTCTG
CAGGCCACTC CGCTGGTCAT GCAGCTGCCG ATCGGTGCCG AGGCGGACTT CAAGGGCGTC
ATCGACCTGG TGAAGATGAA GGCCCTGGTC TGGAGCGCCG AGACCAAGCT GGGCGAGGCC
TACGACGAGG TCGACATCCC GGAGACGCAC ACCGAGGCCG CCGACGAGTG GCGCGGGCGT
CTGCTGGAGA CCATCGCCGA GGCCGACGAC GAGATGATGG AGCTGTACCT GGAGGGCCAG
GAGCCCACCA CGGAGCAGCT GTTCGCGGCC ATCCGCCGCG CCACCCTCGC CGCCAAGCTC
AACCCGGTGT TCTGCGGGAC CGCGTTCAAG AACAAGGGCG TCCAGCCCCT GCTCGACGCG
ATCGTGCGCT ACCTCCCCTC CCCGCTCGAC GTGGAGGCCA TCGACGGCCA CAAGGTGGGC
GACGAGGAGA CGGTGCTGCA CCGCAAGCCC TCCGACGACG AGCCGATGTC CGCGCTGGCG
TTCAAGATCA TGAGCGACCC GCACCTGGGC AAGCTCACGT TCGTGCGCGT CTACTCCGGC
AAGCTGGAGT CCGGCGGCAC GTACCTGAAC TCGGTCAAGG GGCGCAAGGA GCGCATCGGC
AAGATCTACC GCATGCACGC GAACAAGCGT GAGGAGATCG AGTCGGTGGG CGCCGGCGAC
ATCATCGCCG TCATGGGTCT GAAGGACACC ACGACCGGCG AGACGCTGTC GGACACGGCG
AACCCGATCA TCCTGGAGTC GATGACCTTC CCGGCCCCGG TGATCCACGT CGCGATCGAG
CCGAAGACGA AGTCCGACCA GGAGAAGCTG GGTGTCGCCA TCCAGCGCCT GGCCGAGGAG
GACCCGTCCT TCCAGGTTCG CACCGACGAG GAGACCGGCC AGACCGTCAT CTCCGGCATG
GGCGAGCTCC ACCTGGAGAT CCTGGTGGAC CGCATGCGCC GCGAGTTCAA GGTCGAGGCG
AACGTCGGCA AGCCCCAGGT GGCCTACCGC GAGACGATCC GCCGCGCGGT GCCGAAGGTG
GAGTACACGC ACAAGAAGCA GACCGGTGGT TCGGGCCAGT ACGCCTCCGT CATCATCTCG
CTCGAGCCGC TTGCGGACGG CGAGCCGGGT GCCGAGGGCT ACGAGTTCGT CAACGCCGTC
AGCGGCGGCC GCATCCCCAA GGAGTACATC CCCTCGGTGG ACGCCGGCTG CCAGGACGCG
ATGGAGTTCG GCGTGCTCGC CGGCTTCCCG CTGACCGGCG TCAAGGTGAC GCTGCTGGAC
GGCAAGTACC ACGAGGTCGA CTCCTCCGAG ATGGCCTTCA AGGTCGCCGG TTCCATGGCG
TTCAAGGAAG CGGCCCGCAA GGCCGACCCG GCGCTGCTGG AGCCGATGAT GGCGGTCGAG
GTCACCACGC CCGAGGACTA CATGGGCGAC GTGATCGGCG ACCTGAACTC CCGCCGCGGC
CAGATCCAGG CCATGGAGGA GCGGTTCGGC GCCCGGGTCG TCAAGGCCCT GGTTCCGCTG
AGCGAGATGT TCGGCTACGT CGGGGACCTG CGGTCCAAGA CGTCCGGCCG CGCCTCGTAC
AGCATGCAGT TCGACTCCTA CGCCGAGGTT CCCCGGAACG TGGCGGAAGA GATCGTCAAG
AAGGCGCGCG GCGAGTAG
 
Protein sequence
MAPNAVDLAK VRNIGIMAHI DAGKTTTTER ILYYTGMSYK IGEVHDGAAT TDWMEQEQER 
GITITSAAVT CHWSVDDVDN TINIIDTPGH VDFTVEVERS LRVLDGAVAV FDGVAGVEPQ
SETVWRQADR YGVPRICFIN KLDRTGAEFH RCVEMIVTRL QATPLVMQLP IGAEADFKGV
IDLVKMKALV WSAETKLGEA YDEVDIPETH TEAADEWRGR LLETIAEADD EMMELYLEGQ
EPTTEQLFAA IRRATLAAKL NPVFCGTAFK NKGVQPLLDA IVRYLPSPLD VEAIDGHKVG
DEETVLHRKP SDDEPMSALA FKIMSDPHLG KLTFVRVYSG KLESGGTYLN SVKGRKERIG
KIYRMHANKR EEIESVGAGD IIAVMGLKDT TTGETLSDTA NPIILESMTF PAPVIHVAIE
PKTKSDQEKL GVAIQRLAEE DPSFQVRTDE ETGQTVISGM GELHLEILVD RMRREFKVEA
NVGKPQVAYR ETIRRAVPKV EYTHKKQTGG SGQYASVIIS LEPLADGEPG AEGYEFVNAV
SGGRIPKEYI PSVDAGCQDA MEFGVLAGFP LTGVKVTLLD GKYHEVDSSE MAFKVAGSMA
FKEAARKADP ALLEPMMAVE VTTPEDYMGD VIGDLNSRRG QIQAMEERFG ARVVKALVPL
SEMFGYVGDL RSKTSGRASY SMQFDSYAEV PRNVAEEIVK KARGE