| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_0884 |
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| Symbol | |
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| ID | 8332215 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 1029497 |
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| End bp | 1031209 |
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| Gene Length | 1713 bp |
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| Protein Length | 570 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644954035 |
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| Product | putative short chain dehydrogenase |
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| Protein accession | YP_003111658 |
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| Protein GI | 256390094 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.51688 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCGGGTGA TCGAGCGGGG TGAAGTGGAC GAGTTGGTGG GCCGCGTGGC TGATGGGGCT
GCGGGGGTGG GTGAGGGTTT CGGCGGCTCC GGTTCGCATG CCGATTCGCG TTTCGATACC
CATGGCGGTT CGCATTCCGA TACCTATGCC GACTCGCATT CCGAGTCTCA TTCCGATTCC
CACTCCGCTT CCGACTCCGA TTCGGGTGCG GAGGACTTCG GGCCTGGCAT CTCGGCGGAG
CGGCTGGCGC TGCTGCTGGA CATCATGGCT GAGGTCGAGT TGCTGCCGAC GGAGCATCCC
GATGCGGTTG CGGTGCGGCG GGCTACGGCT GGGGTGTACA AGAGCGTCAA GGTGCGGCGG
CGGGCTGAGC GGCAGGCGCG GGTGATGGAG GCGGATCGTG CCGTCACCGC TAAGACCGCT
ACTGGTGCGC CGAGCCGGCT TGATGACGAG ACCCAGGGGT TGCCGCTCAG TTCGGAGACC
GCCGAGTCCG GTAATGCGGT GGCCGGTGTG CTGAAGCGCG AGCGGAGTTG CTATATCTGC
AAGGTGCGTT ATCGCGAGGT GCACGCGTTC TATCACAATC TGTGCCCCGA CTGCGCTGCC
GAGAACTGGA AGCGGCGTGA TGCTCGGACC GACCTGAGTG GCAAGCGTGC GCTGCTTACC
GGCGGGCGCG CGAAGATCGG CATGTATATC GCGCTGCGGC TGTTGCGGGA TGGCGCGCAT
CTGACCATCA CCACCCGCTT TCCCAATGAT GCCGCGCGCC GTTTTGCCGC GATGCCGGAC
AGTGGCGAGT GGTTGCATCG GCTGCGGGTC GTCGGGATCG ATCTGCGGGA TGTGGCGCAG
GTGGTGGCGC TCGCCGATAC GGTTGCCGCC GAGGGTCCGC TCGACATCAT GGTCAACAAT
GCCGCGCAGA CGGTGCGGCG TTCGGCGGGC GCCTACGAGC CGTTGATCCG CGCTGAGTTC
GAGGCGCTGC CGGACGGGCC GTTGCCGGAA CTGATCTCGT TCGGGCGGTT CACCGGTTCA
GGGCTGGTCG CGCTGCCTGG GCAGACGCGG TCTTCGGAGG CGATCGCGGC GGATCTGGTC
GGCGTGCGGG CGTCCGGGGT GGCTGCGGTG GGGGATGTCG CGGGAGCAGA TCTGGTCTCG
CTCGCTCTGA CGGCCGGCTC GGCGACGTTG GATCGGATCA CGGCTGGCAC CGCCATTGAC
GCGGGTGGGC TGGTTCCGGA TCTGGCGGAC ACGAACTCGT GGGTGCAGAC CGTCGAGGAC
GTGGACCCGA TCGAGCTGCT GGAGGTGCAG TTGTGCAACT CGACGGCTCC CTTCGTGCTT
ATCAGTAGGC TGCGTAGCGC GATGAAGGCG TCGTCGTCGC CCCGGAAGCA CATCGTCAAC
GTCTCGGCGA TGGAGGGTGT TTTCAGCCGC GGCTACAAGG GCGCGGGGCA TCCGCACACC
AATATGGCCA AGGCCGCGCT CAACATGCTG ACGCGGACCA GCGCGCGCGA GATGTTCCAG
ACCGACAGCA TCCTGATGAA CAGCGTCGAC ACCGGCTGGA TCACCGACGA GCGGCCGCAT
CCGGACCGCG TCCGGCTGGC GGACGAGGGC TTCCACGCGC CGCTGGACCT GGTCGACGGC
GCGGCGCGGG TCTACGACCC GATCGTGCGC GGCGAGCAGG GCGAGGACCT GTACGGCTGC
TTCCTCAAGG ATTACGCGAA CGCTGGTTGG TAG
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| Protein sequence | MRVIERGEVD ELVGRVADGA AGVGEGFGGS GSHADSRFDT HGGSHSDTYA DSHSESHSDS
HSASDSDSGA EDFGPGISAE RLALLLDIMA EVELLPTEHP DAVAVRRATA GVYKSVKVRR
RAERQARVME ADRAVTAKTA TGAPSRLDDE TQGLPLSSET AESGNAVAGV LKRERSCYIC
KVRYREVHAF YHNLCPDCAA ENWKRRDART DLSGKRALLT GGRAKIGMYI ALRLLRDGAH
LTITTRFPND AARRFAAMPD SGEWLHRLRV VGIDLRDVAQ VVALADTVAA EGPLDIMVNN
AAQTVRRSAG AYEPLIRAEF EALPDGPLPE LISFGRFTGS GLVALPGQTR SSEAIAADLV
GVRASGVAAV GDVAGADLVS LALTAGSATL DRITAGTAID AGGLVPDLAD TNSWVQTVED
VDPIELLEVQ LCNSTAPFVL ISRLRSAMKA SSSPRKHIVN VSAMEGVFSR GYKGAGHPHT
NMAKAALNML TRTSAREMFQ TDSILMNSVD TGWITDERPH PDRVRLADEG FHAPLDLVDG
AARVYDPIVR GEQGEDLYGC FLKDYANAGW
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