| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_0878 |
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| Symbol | |
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| ID | 8332209 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 1020935 |
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| End bp | 1021627 |
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| Gene Length | 693 bp |
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| Protein Length | 230 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644954029 |
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| Product | bifunctional deaminase-reductase domain protein |
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| Protein accession | YP_003111652 |
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| Protein GI | 256390088 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1985] Pyrimidine reductase, riboflavin biosynthesis |
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| TIGRFAM ID | [TIGR00227] riboflavin-specific deaminase C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00173437 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.424313 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCCCGAGC GCCCCCACGT CATCCTCAGC GCCGCCATGT CCCTGGACGG CCACCTCGAC
GACACCACCC CCGACCGCCT CATGCTCTCC GACGACGCGG ACTTCGACCG GGTGGACGCG
CTTCGGGCGG CGTCGGACGC GATCATGGTC GGCGCCGAGA CCATCCGCCG CGACGACCCC
CGCCTGGTCA TCCGCGACCC GGAGCGGCGG GCCGACAGAG TCCGGCGCGG TCTGGCGGAG
CACCCGGTCA AGGTGACGGT GACCGGCGCC GGCGCGCTGG ACCCCGAGGC TCGCTTCTTC
ACCACCGGCG GCCACAAGCT CGTCTACTGC GCCGACGCCG CCGTGCCGAC GCAAGCCGAC
CGCCTCGCCA CCGTCCCGGA CACCGAGGTC GTGGCGGCCG GGGCGCTCGT CGATTTCCCC
GGCATCCTCG CGGACCTGAA GCGGCGCGGC ATCGAGCGGC TGATGGTCGA GGGCGGAAGC
TCGCTCCACA CCCGGTTCCT CGCCGAAGAT CTCGCCGACG AGATCCATCT GGCGATCGCG
CCGTTCTTCG TCGGCGACGA CCAGGCTCCG CGTTTCGTCC GCGCCGCCGA GTTCCCGCAG
AACGCGCGGC ATCGCATGAC CCTCGCGGAG ACCCGGCCGA TCGGGGATCT CGTCTTCGTG
CGGTATGTGA TCGAGAGTGG AAGCGGAAGC TGA
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| Protein sequence | MPERPHVILS AAMSLDGHLD DTTPDRLMLS DDADFDRVDA LRAASDAIMV GAETIRRDDP
RLVIRDPERR ADRVRRGLAE HPVKVTVTGA GALDPEARFF TTGGHKLVYC ADAAVPTQAD
RLATVPDTEV VAAGALVDFP GILADLKRRG IERLMVEGGS SLHTRFLAED LADEIHLAIA
PFFVGDDQAP RFVRAAEFPQ NARHRMTLAE TRPIGDLVFV RYVIESGSGS
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