Gene Caci_0876 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_0876 
Symbol 
ID8332207 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp1018518 
End bp1020632 
Gene Length2115 bp 
Protein Length704 aa 
Translation table11 
GC content71% 
IMG OID644954027 
Producthypothetical protein 
Protein accessionYP_003111650 
Protein GI256390086 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.187127 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.454396 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCCTCA CCGGTCTCAC TGACAGCGAA AAGCGAGTCC GGACGGACTT CCTGGCCGGC 
GGGCGCACGT CGTTCGAGAC CGGCGACCCG GCGGCGGACA CGCGCTCGGT GGGCGCCACA
TGGGGACCGG AGCGCACGCT GCGCGCCGCG TTCATCAGGG GGCTGATCGA GGAAGCCGGC
GACCGCCGCG CGCCGCTGCG AGTCGTCGGC GCCCGCATCG TCGGACCGCT GGAGCTGGAG
TACCTGGAAC TCGGCTACTC CCTGAGCTTC GCGAACTGCT GGTTCCAGGA CGAGATCGAC
CTGCACGACA CCCGCCTGCG CCGCCTGAAC TTGCGCGGCA CGCGCCTGGC GGGCCTGAAC
GCTTCCCTGA CGCGCGTCGA GGCCACCGTG GTGATGCACA TGACGCGGGT CGAGGGACGC
GTCCGCCTCG ACCACGCCGT CATCGGCGGC GAACTCCTGA TCACCGACGC GCACCTGCTC
CACCCCGGCG ACGTCGCCCT GCGCGCCGAA CGGATCCGCG TCGGCGGCGA CCTGATGCTG
TGGGGCACGA CGATCCAGGG GCGCACCGTC CTGCGCGACG CCAAGGTCGA CGGCGTCATG
AGCATGGAGC GCGCCCGCCT CCACGCCCCC GCCGAAGAAG CCCTGGACGC CGCCCGCATC
CAAGTCGGCA GCGACTTCCT AGCCGACGAC CTGCACGCCG AGGGCACCGT CCGCCTCTCC
GGCGCCGACA TCCAAGGCAT CCTCCGCCTC GCCAACGCCA AACTCAGCAA CCCCGGCGCC
ACCACCCTCG AGGCCTACCA GGCAAAAATC GGCGCCGACC TCCAGTGCTA CCGAGGCTTC
GACAGCGACG GCCTGGTCCG CATCACCGGC GCCCACATAG CCGGCCACGC CCGCTTCGAC
GCCGCCACCC TCCGAGGCAA CGGCACCACC GCCCTCGACG CCCGCTACAC CGACATAGGC
GGCGCCGCCC GCCTACGCAC CACCCAAACC GCCGGCGCCC TCCGCTTCAC CAGCGCCCAC
ATCGCCAACG ACCTCGACTT CCGCGAGGCA CGCCTGGTCA GCTCGGTCAC AGAGTTAGGG
CTCGGGCCGG TCTTCGGCGG AGGTGCCACA GCGGGTTTTC CTGGCGCTGG AACGGTTTCA
GCTCCTGGCT TTACCTCCAG CCCGAGTTCC GACCCAAGCG CTGGCTCCAG CCCGAGTCCC
CTCCCAAGCG CTGGGACTAG CGCTGTCGCC AGTACTCCCG GCAACTCCGG TAGCCCTACC
GCGGCCACCA CCGCCAACAC CGCCACACCT GCCCCTAACT CGCTCTCCCC TGACCCAGCC
TCGTCTTCAG CTCCTGTCTC TACCTCCAGC CCGAGTCCCA GCAGTACCAG TTCCGCTGCC
TCAGCCGCCG CCGCACCTAG CTCGCGATCG TCCGCCCCCA CCTCCCCGCC ACCACCCCCC
AACCTCCTCT TCCTCGGCAA CCTTCACGCC GGCGAGCTCA CCCTCCGTTT CGCCGCCCCG
CCCGCCGGCG GCATCCACCT CGCCAACGCC CAAGTCGGCG TCCTCAACGA CGATCCCGCC
TGTTGGCCTC CGCACTTCAC CCGCGACGGC TTCGTCTACG AGCGCATCGC CGAGCCCGGG
CCCGTCCGCT CCCGCATCGC GTGGCTGGCG CGCGAGTCCG CCGGCTACCG TCCCGGTCCC
TATGAGCAGC TCGCGACCGT CTACCGCCGC CAGGGCCTGG ACGGCGAAGC GCGCCGCGTC
CTGCTCGCCA AGCAGCGTGC CCGGCGCCGT ACCCTCTCCC TCGCCGCGCG GCCCTGGGGT
CTGATCCAGG ACGCGGCTGT CGGCTACGGC TATCGTCCCG AGCGTGCGCT GGGGTGGCTC
GCGGCGCTGC TGATCACCGG CGTGGTCGTG TTCGGCGTGC ACCACCCCGT GCCCCTCGGA
CCGGACAAAG CGCCGCCCTT CAATCCCCTG ATCTACTCCC TCGACCTGCT CCTGCCGGTC
ATCAACTTCG GCCAGGGCCG CGCCTACATC GCGACCGGCG GCTGGCAGTG GATCGCCTAT
CTGCTCACCG CCGCCGGCTG GATTCTCGCC ACCACCATCG CCGCCGGCGT GGCACGGGCC
GTCAACCGCG CATAA
 
Protein sequence
MRLTGLTDSE KRVRTDFLAG GRTSFETGDP AADTRSVGAT WGPERTLRAA FIRGLIEEAG 
DRRAPLRVVG ARIVGPLELE YLELGYSLSF ANCWFQDEID LHDTRLRRLN LRGTRLAGLN
ASLTRVEATV VMHMTRVEGR VRLDHAVIGG ELLITDAHLL HPGDVALRAE RIRVGGDLML
WGTTIQGRTV LRDAKVDGVM SMERARLHAP AEEALDAARI QVGSDFLADD LHAEGTVRLS
GADIQGILRL ANAKLSNPGA TTLEAYQAKI GADLQCYRGF DSDGLVRITG AHIAGHARFD
AATLRGNGTT ALDARYTDIG GAARLRTTQT AGALRFTSAH IANDLDFREA RLVSSVTELG
LGPVFGGGAT AGFPGAGTVS APGFTSSPSS DPSAGSSPSP LPSAGTSAVA STPGNSGSPT
AATTANTATP APNSLSPDPA SSSAPVSTSS PSPSSTSSAA SAAAAPSSRS SAPTSPPPPP
NLLFLGNLHA GELTLRFAAP PAGGIHLANA QVGVLNDDPA CWPPHFTRDG FVYERIAEPG
PVRSRIAWLA RESAGYRPGP YEQLATVYRR QGLDGEARRV LLAKQRARRR TLSLAARPWG
LIQDAAVGYG YRPERALGWL AALLITGVVV FGVHHPVPLG PDKAPPFNPL IYSLDLLLPV
INFGQGRAYI ATGGWQWIAY LLTAAGWILA TTIAAGVARA VNRA