Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_0858 |
Symbol | |
ID | 8332188 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 995009 |
End bp | 995500 |
Gene Length | 492 bp |
Protein Length | 163 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 644954008 |
Product | protein of unknown function DUF520 |
Protein accession | YP_003111632 |
Protein GI | 256390068 |
COG category | [S] Function unknown |
COG ID | [COG1666] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.83182 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.00457625 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGGCTTCGG AGTCGTCGTT CGACGTGGTG AGCAAGGTCG AGAGGCAGGA GGTCGACAAC GCGCTCAACC AGGCGTCGAA GGAGATCGCT CAGCGCTTCG ACTTCCGCGG GGTGGACGCT GAGATCCGGT GGTCCGGCGA GGGCATCGAG ATGCGGGCGA ACTCCGAGGA GCGGGTCGCG GCGGTGCTCG ATGTATTCAA GGACAAGCTG GTCAAGCGCA AGATCTCGCT GAAGGTGCTG GACGCCTCGG AACCGCGGGT CTCCGGCAAG GAGTACCGGA TCAGCGTCGC GATCAAGGAG GGCATCTCCT CGGAGAACGC GAAGAAGATC TCCAAGCTGA TCCGCGACGA GGCGCCGAAG AGCGTCAAGG CGCAGATCAT CGGCGAGGAG CTGCGGGTGT CCTCCAAGTC GCGCGACGAC CTGCAGGCGA CACAGTCGCT GCTGAAGGAG CAGGACTACG ACTTCGCGGT CCAGTTCACC AACTACCGGT GA
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Protein sequence | MASESSFDVV SKVERQEVDN ALNQASKEIA QRFDFRGVDA EIRWSGEGIE MRANSEERVA AVLDVFKDKL VKRKISLKVL DASEPRVSGK EYRISVAIKE GISSENAKKI SKLIRDEAPK SVKAQIIGEE LRVSSKSRDD LQATQSLLKE QDYDFAVQFT NYR
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