Gene Caci_0858 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_0858 
Symbol 
ID8332188 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp995009 
End bp995500 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content64% 
IMG OID644954008 
Productprotein of unknown function DUF520 
Protein accessionYP_003111632 
Protein GI256390068 
COG category[S] Function unknown 
COG ID[COG1666] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.83182 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.00457625 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGGCTTCGG AGTCGTCGTT CGACGTGGTG AGCAAGGTCG AGAGGCAGGA GGTCGACAAC 
GCGCTCAACC AGGCGTCGAA GGAGATCGCT CAGCGCTTCG ACTTCCGCGG GGTGGACGCT
GAGATCCGGT GGTCCGGCGA GGGCATCGAG ATGCGGGCGA ACTCCGAGGA GCGGGTCGCG
GCGGTGCTCG ATGTATTCAA GGACAAGCTG GTCAAGCGCA AGATCTCGCT GAAGGTGCTG
GACGCCTCGG AACCGCGGGT CTCCGGCAAG GAGTACCGGA TCAGCGTCGC GATCAAGGAG
GGCATCTCCT CGGAGAACGC GAAGAAGATC TCCAAGCTGA TCCGCGACGA GGCGCCGAAG
AGCGTCAAGG CGCAGATCAT CGGCGAGGAG CTGCGGGTGT CCTCCAAGTC GCGCGACGAC
CTGCAGGCGA CACAGTCGCT GCTGAAGGAG CAGGACTACG ACTTCGCGGT CCAGTTCACC
AACTACCGGT GA
 
Protein sequence
MASESSFDVV SKVERQEVDN ALNQASKEIA QRFDFRGVDA EIRWSGEGIE MRANSEERVA 
AVLDVFKDKL VKRKISLKVL DASEPRVSGK EYRISVAIKE GISSENAKKI SKLIRDEAPK
SVKAQIIGEE LRVSSKSRDD LQATQSLLKE QDYDFAVQFT NYR