Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_0827 |
Symbol | |
ID | 8332157 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 961680 |
End bp | 962081 |
Gene Length | 402 bp |
Protein Length | 133 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 644953978 |
Product | PilT protein domain protein |
Protein accession | YP_003111602 |
Protein GI | 256390038 |
COG category | [R] General function prediction only |
COG ID | [COG1487] Predicted nucleic acid-binding protein, contains PIN domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.00471695 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCCGCAGC CTGTCGTGAT GGACACGGAC GTCGCGTCCG CGTCCTTCAA GCGCAAGGCG CTTCCACTGC TCGTCAAAGT AGCCACGATG GAGCCGGTCA TCACGTTCGT GACGTTCGGC GAGTTGGTGA AGTGGACCGA GCGTCGGCAC TGGGCTCCCC ACAACCGGGT CGCGATGGAC AGCTGGCTTG CAGCCATGCC TGTTCTCGAC AGCACCGAAG CCATCGCCAG GACTTGGGGT TCACTAGCCG CGGCCGCGGA TGAGCGCGGA CGTCCCAGAC CGCAGAACGA CATGTGGATC GCGGCTGTCT GTCTGACCTA CGGCATTCCG CTAGCGACGT TCAACCTCAA GGACTATGCC GATTTCGAGG CCTATCACGG GCTTCACATC GTCAAGGTCT AG
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Protein sequence | MPQPVVMDTD VASASFKRKA LPLLVKVATM EPVITFVTFG ELVKWTERRH WAPHNRVAMD SWLAAMPVLD STEAIARTWG SLAAAADERG RPRPQNDMWI AAVCLTYGIP LATFNLKDYA DFEAYHGLHI VKV
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