| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_0787 |
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| Symbol | deoA |
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| ID | 8332117 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 919156 |
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| End bp | 920445 |
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| Gene Length | 1290 bp |
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| Protein Length | 429 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 644953939 |
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| Product | thymidine phosphorylase |
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| Protein accession | YP_003111563 |
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| Protein GI | 256389999 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0213] Thymidine phosphorylase |
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| TIGRFAM ID | [TIGR02644] pyrimidine-nucleoside phosphorylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACGCCA TCACCGTCAT CCGCGCCAAG CGCGACCGCG CGGAGCTCAC CGACGAGCAG
ATCGACTGGA TCCTCGCCGC CTACACCGAC GGCCGGGTGG CCGAGGAGCA GATGTCCGCG
CTGGCGATGG CGATCCTGCT CAACGGCATG AACCGGCGCG AGATCTCACG CTGGACGCAG
GCGATGATCG ACTCCGGCGA GCGGATGGAC TTCTCCGCGC TCACGCGCCC GACCGTGGAC
AAGCACTCCA CCGGCGGCGT CGGCGACAAG ATCACGCTGC CGCTGGCGCC GCTGGTGGCG
GCGTGCGGCG CGGCGGTCCC GCAGCTGTCC GGCCGCGGTC TGGGCCACAC CGGCGGCACG
CTGGACAAGC TGGAGTCGAT CCCGGGCTGG CGCGCCTCGC TGTCCACCGC CGAGATGCTC
GCGATCCTGG CCGACGCCGG CGCCGTGGTC TGCGCGGCCG GCGACGGTCT GGCGCCGGCG
GACAAGAAGC TCTACGCGCT GCGCGACGTC ACCGGGACCG TCGAGGCGAT CCCGCTGATC
GCGTCCTCGA TCATGTCCAA GAAGATCGCG GAGGGCACCG GCGCGCTGGT GCTGGACGTG
AAGTGCGGCA GCGGCGCGTT CATGAAGGAC TTCGCCGACG CCCGCGAACT GGCCGAGACC
ATGGTCGCCC TCGGCACCGA CCACGGCGTC CGCACCACCG CGCTGATCAC CGCGATGGAC
ACCCCGCTGG GCCGCACCGC GGGCAACGCC CTGGAGGTGC GCGAGTCGGT CGAGGTGCTC
TCCGGCGGCG GTCCGGCCGA CATCAGGGAG CTGACACTCG CGCTCGCCCG CGAGATGCTC
GACGCCGCCG GCCTGGCCGG CGTGGACCCG GCGGCCAAGC TCGACGACGG CTCGGCGCTG
GACGCCTGGA AGCGCATGAT CCGCGCCCAG GGCGGCGATC CCGACGCCCC GCTGCCGACG
GCGAAGGAGA CCCACGTGGT CGCCGCCGAC CGCGACGGCG TCCTGGTCGC CATGGACTCC
TTCAAGGTCG GCGTGGCCGC CTGGCGCCTC GGCGCGGGCC GGGCGCGCAA GGAGGACGCG
GTGCAGGCCG GCGCCGGCGT GGAGTGGCAC GCGGTCCCCG GCGACACCGT GCGCGCCGGA
CAGCCGCTGT TCACCCTGCA CACCGACACC CCGGAGACCT TCGACACCGC GCTGGAAAGC
CTGGCCGGCG CCTGCGACAT CGCCGCGCCG GGGACGGAGT TCACCCGGTC GCCGCTTGTC
CTGGACCGCG TCGCCGCCTC GAACCGGTAG
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| Protein sequence | MDAITVIRAK RDRAELTDEQ IDWILAAYTD GRVAEEQMSA LAMAILLNGM NRREISRWTQ
AMIDSGERMD FSALTRPTVD KHSTGGVGDK ITLPLAPLVA ACGAAVPQLS GRGLGHTGGT
LDKLESIPGW RASLSTAEML AILADAGAVV CAAGDGLAPA DKKLYALRDV TGTVEAIPLI
ASSIMSKKIA EGTGALVLDV KCGSGAFMKD FADARELAET MVALGTDHGV RTTALITAMD
TPLGRTAGNA LEVRESVEVL SGGGPADIRE LTLALAREML DAAGLAGVDP AAKLDDGSAL
DAWKRMIRAQ GGDPDAPLPT AKETHVVAAD RDGVLVAMDS FKVGVAAWRL GAGRARKEDA
VQAGAGVEWH AVPGDTVRAG QPLFTLHTDT PETFDTALES LAGACDIAAP GTEFTRSPLV
LDRVAASNR
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