Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_0763 |
Symbol | |
ID | 8332093 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 894034 |
End bp | 894660 |
Gene Length | 627 bp |
Protein Length | 208 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 644953915 |
Product | two component transcriptional regulator, LuxR family |
Protein accession | YP_003111539 |
Protein GI | 256389975 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.313515 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCACCG CAGCCGCCGA CGTCGTCCGC CTCCTGCTCG CCGAGGATCA GGCCATGGTG CGGGGTGCCT TGGCGACGTT GCTGAACCTG GAGGACGACC TGGAGGTCGT CGCCGAGGTC GGGCGGGGGG ACGAGGTGCT GGCGGCGGCC AAGGCGGCTG ATGTGCGGGT CGCCTTGCTG GACATCGAGA TGCCGGGGAT GTCGGGGTTG GATGCCGCCG ACGCTTTGCA TCGGGCGATG CCGGAGGTGC GCATCATCAT TCTGACCACG TTCGGGCGTC CCGGGTTTCT GCGGCGGGCC ATGGAGTCGG GTGCTTCGGC GTTCCTGGTG AAGGACGCGC CGGTGGCCGA GTTGGTCGCG GCCATTCGCA AGGTGCTGCG GGGGGAGCGG GTCATCGATC CGGATCTGGC CGCCGCCGCG CTGGCCGCCG GGGAGAATCC GTTGACGCCG CGGGAGCGCG ATGTGCTCGC CGCCTCCGCC GACGGCTCCA CCATCGCCGA CATCGCCCGG CGGCTGCACC TGTCGGAGGG CACGGTGCGC AACTACCTGT CGGCGTGCAT TCAGAAGACC GCCGCCCGGA ACCGCACTGA GGCGGTCCGG ACGGCGCAGC AGCGCGGCTG GTTGTAG
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Protein sequence | MTTAAADVVR LLLAEDQAMV RGALATLLNL EDDLEVVAEV GRGDEVLAAA KAADVRVALL DIEMPGMSGL DAADALHRAM PEVRIIILTT FGRPGFLRRA MESGASAFLV KDAPVAELVA AIRKVLRGER VIDPDLAAAA LAAGENPLTP RERDVLAASA DGSTIADIAR RLHLSEGTVR NYLSACIQKT AARNRTEAVR TAQQRGWL
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