Gene Caci_0744 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_0744 
Symbol 
ID8332074 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp866774 
End bp867415 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content64% 
IMG OID644953896 
ProductLysine exporter protein (LYSE/YGGA) 
Protein accessionYP_003111520 
Protein GI256389956 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1280] Putative threonine efflux protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.295219 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.475947 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGGGTGCA TGGACGGTTC TGTGCTGCAC GCGCTGGTTT CGTTCGCCCT TGTCGCGGGG 
CTTGTCACCG TTATTCCTGG GTTGGATACG GCGGTGGTGC TGCGGTCGGC TTTGGTGTTG
GGGCGGGGGC AGGCGTTTGG TGCTGCTTTC GGGGTGACGT TCGGGGCTTT GGTGTGGGGT
GCGGCTGCGG CTACTGGGGT TTCGGTGCTG CTGACTGCTT CGCATGCGGC GTATACCGGG
TTGCGGGTGG TGGGCGCCTT GTACTTGCTG TGGATGGGGA TGGGGATGGT GCGGGCTGCT
TGGCGGGGGG AGCTTTCGCA GGGTTCGGAG CAGGTTCCTG ATACCGGGTT GGTGCGGGCT
TTTCTGCGGG GTGCCGGGAC CAATTTGCTG AATCCGAAGG TGGGGGCGTT CTATATCGCG
GTGTTTCCGC AGTTCATGCC GGTGCATGTG TCGCATTTGG CCATGGGGCT TGGTTTGGCG
GGGGTGCATG ACCTTGAGGC GATGGTGTGG TTCAGTGTGC TGATTCTTGG GGCGCATCGG
GCTCGGGCTT GGTTCGCCAA GCGGCGGGTG AAGCGGGCGT TGGATGCGGT GACCGGGACG
GTGTTGGTCG GGTTCGGGGT GGAGTTGGCG TTGCGCGGGT GA
 
Protein sequence
MGCMDGSVLH ALVSFALVAG LVTVIPGLDT AVVLRSALVL GRGQAFGAAF GVTFGALVWG 
AAAATGVSVL LTASHAAYTG LRVVGALYLL WMGMGMVRAA WRGELSQGSE QVPDTGLVRA
FLRGAGTNLL NPKVGAFYIA VFPQFMPVHV SHLAMGLGLA GVHDLEAMVW FSVLILGAHR
ARAWFAKRRV KRALDAVTGT VLVGFGVELA LRG