Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_0744 |
Symbol | |
ID | 8332074 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 866774 |
End bp | 867415 |
Gene Length | 642 bp |
Protein Length | 213 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 644953896 |
Product | Lysine exporter protein (LYSE/YGGA) |
Protein accession | YP_003111520 |
Protein GI | 256389956 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1280] Putative threonine efflux protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.295219 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.475947 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGGGTGCA TGGACGGTTC TGTGCTGCAC GCGCTGGTTT CGTTCGCCCT TGTCGCGGGG CTTGTCACCG TTATTCCTGG GTTGGATACG GCGGTGGTGC TGCGGTCGGC TTTGGTGTTG GGGCGGGGGC AGGCGTTTGG TGCTGCTTTC GGGGTGACGT TCGGGGCTTT GGTGTGGGGT GCGGCTGCGG CTACTGGGGT TTCGGTGCTG CTGACTGCTT CGCATGCGGC GTATACCGGG TTGCGGGTGG TGGGCGCCTT GTACTTGCTG TGGATGGGGA TGGGGATGGT GCGGGCTGCT TGGCGGGGGG AGCTTTCGCA GGGTTCGGAG CAGGTTCCTG ATACCGGGTT GGTGCGGGCT TTTCTGCGGG GTGCCGGGAC CAATTTGCTG AATCCGAAGG TGGGGGCGTT CTATATCGCG GTGTTTCCGC AGTTCATGCC GGTGCATGTG TCGCATTTGG CCATGGGGCT TGGTTTGGCG GGGGTGCATG ACCTTGAGGC GATGGTGTGG TTCAGTGTGC TGATTCTTGG GGCGCATCGG GCTCGGGCTT GGTTCGCCAA GCGGCGGGTG AAGCGGGCGT TGGATGCGGT GACCGGGACG GTGTTGGTCG GGTTCGGGGT GGAGTTGGCG TTGCGCGGGT GA
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Protein sequence | MGCMDGSVLH ALVSFALVAG LVTVIPGLDT AVVLRSALVL GRGQAFGAAF GVTFGALVWG AAAATGVSVL LTASHAAYTG LRVVGALYLL WMGMGMVRAA WRGELSQGSE QVPDTGLVRA FLRGAGTNLL NPKVGAFYIA VFPQFMPVHV SHLAMGLGLA GVHDLEAMVW FSVLILGAHR ARAWFAKRRV KRALDAVTGT VLVGFGVELA LRG
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