Gene Caci_0739 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_0739 
Symbol 
ID8332069 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp861040 
End bp861672 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content66% 
IMG OID644953891 
Productprotein of unknown function DUF47 
Protein accessionYP_003111515 
Protein GI256389951 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1392] Phosphate transport regulator (distant homolog of PhoU) 
TIGRFAM ID[TIGR00153] conserved hypothetical protein TIGR00153 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.398486 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAACTGC GTCTGACCCC CAGGGAGACC AGCTTCTACG ACCTGTTCGC CGAGCAGGCT 
GACCATCTCG TCGTCGGCGC CGGAATCCTC ACCGAACTGC TCGGCGCCGG AGGGCCTGAG
AACGGAGCGG AGCGCGCCAA GATCGCCGAG CGGATGCGCG CCGCGGAACA CGCCGCGGAC
GACACCACGC ACAAGATCTA CAACACGCTG AACTCCTCGT TCATCACGCC GTTCGACCGA
GAGGACATCT ACGCGCTGGC CTCGACCCTG GACGACGTCA TGGACGAGAT GGAGGAGGCC
GTGGACCTGG TTAACCTCTA CGGCATCCAG ATGCTGCCGG CCGGGGTCGC CGAGCAGGTC
GACACGCTGG TGCGGGCCGC GGAGCTGACC GCCATGGCGA TGCGCAAGCT GCGCGGGATG
AAGGACCTGA CCGAGTACTG GATCGAGGTC AACCGGCTGG AGAACGCCGC CGACCAGTCC
TACCGCAAGC TGCTGGCCCA CCTGTTCTCC GGGGAGTACG ACGCGCTGAC GGTGATGAAG
CTCAAGGAGG TCGTCGACTC CTTGGAGGGC GCGGCCGACG CCTTCGAGCA CGTGGCCAAC
ACGGTCGAGT CCATCGTCGT CAAGGAGTCC TGA
 
Protein sequence
MKLRLTPRET SFYDLFAEQA DHLVVGAGIL TELLGAGGPE NGAERAKIAE RMRAAEHAAD 
DTTHKIYNTL NSSFITPFDR EDIYALASTL DDVMDEMEEA VDLVNLYGIQ MLPAGVAEQV
DTLVRAAELT AMAMRKLRGM KDLTEYWIEV NRLENAADQS YRKLLAHLFS GEYDALTVMK
LKEVVDSLEG AADAFEHVAN TVESIVVKES