| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_0735 |
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| Symbol | |
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| ID | 8332065 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 857547 |
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| End bp | 858212 |
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| Gene Length | 666 bp |
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| Protein Length | 221 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644953887 |
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| Product | Hly-III family protein |
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| Protein accession | YP_003111511 |
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| Protein GI | 256389947 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1272] Predicted membrane protein, hemolysin III homolog |
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| TIGRFAM ID | [TIGR01065] channel protein, hemolysin III family |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.96955 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.774443 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACTGCGC TGACGAATGC CGTATCGAAC GCCGTCACCC CGATGAAGCC GAAGCTGCGC
GGCTGGCTGC ACCTGTGCGC GGCGCCGCTG GCGCTGGCCG GCGGGATCGT GCTGATCGCG
CTGGCCGACA ACGGCCGGGC GCGGATCGCC TCCGCCGTGT TCGCCTTCTC CGCCGTGATG
CTGTTCGGCA CTTCCGCGCT GTACCACCGG CGCACCTGGG GTCCGCGCGG CGAGGCGATC
CTGCGCCGGC TGGACCACGC GAACATCTTC CTGATCATCG CCGGGACCTA CACGCCGTTC
ACCGTGCTGC TGCTGCACGG GAGCGCCGAG CGCGCGCTGC TGTACACCGT CTGGATCGGC
GCGTTGGCCG GCATAGCTTT CCGGGTCTTC TGGCTCGGGG CGCCGCGCTG GATCTACACG
CCGTGCTACG TGGCGCTGGG CTGGGCCGCG GTGTTCTTCA TGCCGCAGTT CCTGCACTCC
GGCGGCGTCG CGATCCTGGT CATGATGATC GTGGGCGGCG TGCTGTACTC GATCGGCGCG
CTGGTCTACG GCACGAAGCG GCCGGACCTG TCGCCGAAGT GGTTCGGGTT CCACGAGGTG
TTCCACACGC TGACGATCGC GGCGTTCTCG CTGCACTTCA TCGGGGTGTC GCTGGCCGCG
ATGTAG
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| Protein sequence | MTALTNAVSN AVTPMKPKLR GWLHLCAAPL ALAGGIVLIA LADNGRARIA SAVFAFSAVM
LFGTSALYHR RTWGPRGEAI LRRLDHANIF LIIAGTYTPF TVLLLHGSAE RALLYTVWIG
ALAGIAFRVF WLGAPRWIYT PCYVALGWAA VFFMPQFLHS GGVAILVMMI VGGVLYSIGA
LVYGTKRPDL SPKWFGFHEV FHTLTIAAFS LHFIGVSLAA M
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