Gene Caci_0717 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_0717 
Symbol 
ID8332047 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand- 
Start bp835783 
End bp836511 
Gene Length729 bp 
Protein Length242 aa 
Translation table11 
GC content71% 
IMG OID644953869 
Producthypothetical protein 
Protein accessionYP_003111493 
Protein GI256389929 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones8 
Plasmid unclonability p-value0.00202247 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.112494 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCCTC GCGAAGCACC CGTGCCGCCA GCGATAGCCG CCCTGCCGCA CGACCCGCGC 
GGCTACCCGA TCCCCGCGAT CACGCCGCGC GACGCCGAGG GCACCCCGAC ATTCGCCATC 
ACCGGCAGCG CCCGCTCGCT GATCTGCGCA ATAGAGCGCC GCTGCTCGAT CTGCGGCACC 
CCGATGGCGC CAGGACCGGT CTACCGCGTC ATCGCGGCGG CCGAAACCGA GGCCCTGGCA 
GCCGCGCACG CCGCCGGCCA GACCACCGCC GCCAACAAGG CACCCTCCCC CGAACCACCG 
GGACACCGCG ACTGCATGCT CTTCGCCGCC TTCACCTGCC CCTTCCTAGC GCGCCCCAAC 
GCCCGCCGCG GGCAGGACGC GGAGGTCATG GGCGCCTCCC TGTCCCGAGG CACGGCACGC 
GGCAGCTCGA CGGAGACCGG CAGCCAGACC GGCGGCGCCG TCGCAGGCTT CGCAGAGTAC 
GAATTCAGCT ACACACCCGG CTCCAACCAG GTGGCGTTTC TCTTCTCCGG CTTGACCGAA 
CTACGCATCC ACCAACTCGG CGCCGACCAG ATTCCCGAAC TCATCACCGC CCTCGCCGAC 
GCCGAGCCGC CGACCGAATC ATGCCCGCCG TACCTGCTCG ACGACGAGGA AGCCGCCACA 
GAGCACGCCC GCGAGCTGCT GGAGGCGGCG ATCGCGCGGA GCCGGAACGC GGGCGCTACC 
AAAGCGTGA
 
Protein sequence
MTPREAPVPP AIAALPHDPR GYPIPAITPR DAEGTPTFAI TGSARSLICA IERRCSICGT 
PMAPGPVYRV IAAAETEALA AAHAAGQTTA ANKAPSPEPP GHRDCMLFAA FTCPFLARPN 
ARRGQDAEVM GASLSRGTAR GSSTETGSQT GGAVAGFAEY EFSYTPGSNQ VAFLFSGLTE 
LRIHQLGADQ IPELITALAD AEPPTESCPP YLLDDEEAAT EHARELLEAA IARSRNAGAT 
KA