Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_0701 |
Symbol | |
ID | 8332031 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 819209 |
End bp | 819655 |
Gene Length | 447 bp |
Protein Length | 148 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 644953853 |
Product | transcriptional regulator, MarR family |
Protein accession | YP_003111477 |
Protein GI | 256389913 |
COG category | [K] Transcription |
COG ID | [COG1846] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.255287 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.732921 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGCCCCG TCACGCCGAT CTTCACCGAC CTCGTCCGCG TCGAGACCCG CCTCTACAAC GCCGTGAGCG CGCGCCTGCG CACCGAGCAC GACGTGAGCC TCGGCCAGTT CGAGTTCCTG GAGATCATCG ACCGCGTCCC GGGCTGCCGC GTCCTCGACA TCGTGGGCGA GGTCGCGATC ACCGTCGGCG CCGTCAGCAA AGCGGTGGAC CGGCTCGTCG CCGCGGGCTG GTGCGTGCGC GTCCCGCACC CCCAGGACCG CCGCTCGTCC GTCCTGCGCC TCACCGCCGA GGGCGAGAAG GTGCTGGCGG CGTGCCGACC CGTCGTCGAG GACGAACTCG CGGCACTGAC GGCGGGGATT TCCCAGGGCG ACCTGACGCG CGTCGGCGCG ACCATGGCCG CGCTTCGTGC CTCGCTCGAG GCGGGAGCTC AGGGGCAGCC GGGCTGA
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Protein sequence | MSPVTPIFTD LVRVETRLYN AVSARLRTEH DVSLGQFEFL EIIDRVPGCR VLDIVGEVAI TVGAVSKAVD RLVAAGWCVR VPHPQDRRSS VLRLTAEGEK VLAACRPVVE DELAALTAGI SQGDLTRVGA TMAALRASLE AGAQGQPG
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