Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_0692 |
Symbol | |
ID | 8332022 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 804362 |
End bp | 805120 |
Gene Length | 759 bp |
Protein Length | 252 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 644953844 |
Product | ABC transporter related |
Protein accession | YP_003111468 |
Protein GI | 256389904 |
COG category | [V] Defense mechanisms |
COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGAGG CGATCACACG GACGGTCCCG GAGGCGATCA CGCTCCAGGC CGTCAGCAAG GTCTACGGCA AGGGACGCGG GGCGGTCGCG GCACTGCGCG AGGTCTCGGT CGGGCTGCCC AAGGGCGGCT TCACCGCGAT CATGGGCCCG TCCGGATCCG GCAAGAGCAC CTTCCTGCAC TGTGCCGCCG GGCTGGACCG GCCGAGCGCG GGCACCGTCA AACTCGGCGG GACCGACTTG TCAGGGCTCA GCGACACCAA GCTGACCGAG CTGCGCCGCG AGCGCGCGGG CTTCGTCTTC CAGGCGTTCA ATCTGGTGTC CTCGCTGACC GTCAGCCAGA ACATCACGCT GCCGCTGCGC CTGGCCGGCA AGCGTGCCGA CCGCGCACGG CTGGCGGCGG TGCTCCAGCG CGTCGGTCTC ACCGATCGCA CCGGCCACCG TCCCGGCCAG CTCTCCGGCG GTCAGCAGCA GCGGGTCGCG ATCGCCCGGG CGCTGATCGC CGACCCCGAG GTGATCTTCG CTGACGAGCC CACCGGCGCC CTGGACACCA TGACCGCGCG CGGGGTGCTG GTCTTGCTGC GCGAGACCGT GGACACGATG GGCCAGACGA TCGTCATGGT CACGCACGAC CCGGTCGCCG CCGCGTACGC CGACACGGTC CTGTTCCTCG CCGACGGCCG CATCGCCGAC TCGATGCACG CACCGACCGC CGCCGGTGTC GCCGACCGCA TGATCCGGCT GGGAGCGTGG GCGCGATGA
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Protein sequence | MNEAITRTVP EAITLQAVSK VYGKGRGAVA ALREVSVGLP KGGFTAIMGP SGSGKSTFLH CAAGLDRPSA GTVKLGGTDL SGLSDTKLTE LRRERAGFVF QAFNLVSSLT VSQNITLPLR LAGKRADRAR LAAVLQRVGL TDRTGHRPGQ LSGGQQQRVA IARALIADPE VIFADEPTGA LDTMTARGVL VLLRETVDTM GQTIVMVTHD PVAAAYADTV LFLADGRIAD SMHAPTAAGV ADRMIRLGAW AR
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