| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_0691 |
|---|
| Symbol | |
|---|
| ID | 8332021 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | - |
|---|
| Start bp | 803667 |
|---|
| End bp | 804239 |
|---|
| Gene Length | 573 bp |
|---|
| Protein Length | 190 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 644953843 |
|---|
| Product | two component transcriptional regulator, LuxR family |
|---|
| Protein accession | YP_003111467 |
|---|
| Protein GI | 256389903 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCGCGGCG CCCTGGCCGC CCTGCTGGAG CTGGAGCCGG ACCTGCGGGT CGTGGCGCAG
ACCGCGACCG GCGACGAGGT GGTGCCGCAG GCGCTGGTGT TCGCGCCGGA CGTGGCGCTG
CTGGACATCG ACATGCCCGG GACCATCGAC GGGCTCGAGG CGGCGGCGCG GCTGAAGGAG
CAGCTGCCGA CCTGCCGCAC CCTGATGCTG ACGTCCAACG GCCGCCCCGG CATGCTGCGC
CGCGCGCTGG AGGCGAAGGT GGACGGCTTC CTGCTGAAGA CGGCGCCACC GGAGGAGCTG
ACCGCCGCCA TCCGCACCGT CGCCGCCGGC GGTCGGGTGC TCGACCCGAC GCTCGCGGTC
ACCGCCTGGG ACCTCGCCGA GAACCCGCTG ACGCCGCGCG AACGGGACGT CCTGCGGGAG
CTGGCCGGCG GCGCCGAGCC GCCCGAGATC GCCGCCACGC TGCACCTGTC GACGGGGACG
GTGCGGAACG TGCTCACGGC GATCGTGGGG AAGCTGAACG CGCGGAACCG GACGGACGCG
GTCCGGATCG CTCGCGATGC CGGGTGGGTG TAA
|
|---|
| Protein sequence | MRGALAALLE LEPDLRVVAQ TATGDEVVPQ ALVFAPDVAL LDIDMPGTID GLEAAARLKE
QLPTCRTLML TSNGRPGMLR RALEAKVDGF LLKTAPPEEL TAAIRTVAAG GRVLDPTLAV
TAWDLAENPL TPRERDVLRE LAGGAEPPEI AATLHLSTGT VRNVLTAIVG KLNARNRTDA
VRIARDAGWV
|
|---|
| |