Gene Caci_0684 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_0684 
Symbol 
ID8332014 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp794395 
End bp796920 
Gene Length2526 bp 
Protein Length841 aa 
Translation table11 
GC content69% 
IMG OID644953836 
ProductATPase AAA-2 domain protein 
Protein accessionYP_003111460 
Protein GI256389896 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0542] ATPases with chaperone activity, ATP-binding subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCTCCT ACGGCGGCTT CTTCGACCGT TCCGACGATC CCTTCAACGA CCTGCTCAAC 
CGGTTCTTCG GGATGTCACC GGAGTTCTCG CCCCCGCGGG TCCAGCGCGT GCCGATCGGG
CAGCTGCTGA CCGACTCGGC GCGGGAGCTG ATCTCCACCG CCTCGCAGCG CGCGGGCCAG
GACGGCAGCT CCGACCTCGA CACCGAGCAC CTGCTCTGGG CGGCGACGCA GGTCGAGCCG
ACGCGCGGCA TCCTGGCCGC GGCCAACGTC GACCCGGACC GGCTGGCGCA GACGATCAAG
AAGTCGCTGC CGGCCTCCGG GAGCACGCCG TCGGCTGAGC CCGGGCTCAC GCCGGCTGCC
AAGCGCGTGC TGATGCGCGC TCACGAGCTG TCTCGGAGCT CCGGCTCGAC GTACATCGGG
CCGCAGCACA TCCTGGCGGC GCTGACCGAG GACCAGGACT CCGGCGCCGG GCACGTGCTG
AACACCACGC AGGTGGACGC CAAGGACCTG GGCAAGCGCA TCACGAAGGC TTCGCGCGCC
GAGGGCATGC CCACCGGTCC GGAGCAGCCG TCGGACACTC CGACGCTGGA CGAGTACGGC
CGGGACATGA CCGAGGACGC CAAGGCCGGC AAGCTCGACC CGGTGGTGGG CCGCGCCGAC
GAGATCGAGC AGACCGTCGA GGTGCTGTCC CGGCGCACCA AGAACAACCC GGTGCTGATC
GGCGATCCCG GCGTCGGCAA GACGGCGATC GTGGAGGGTC TGGCGCAGCG CATCGTCTCC
GGCGACGTGC CGACGACGCT GGAGGGCAAG CGGGTCGTGA TGCTGGACCT GGCCGCCCTG
GTCGCCGGGT CGAAGTACCG CGGGGAGTTC GAGGAGCGGC TGAAGAACGT CATCGACGAG
GTCGGCAAGG CCGCCGACTC CACGATCCTG TTCATCGACG AGCTCCACAC GGTCGTCGGC
GCGGGCTCCG GCGGCGAGGG TTCCATGGAC GCCGGCAACA TCATGAAGCC GGCGCTGTCG
CGCGGCGAGC TGAACGTCAT CGGCGCCACG ACCATCGACG AGTACCGCAA GAACATCGAG
AAGGACGCCG CGCTGGAGCG GCGCTTCCAG CCGGTGCTGA TCGCCGAGCC CACGGTCGAG
GAGACCATCG AGATCCTGGA GGGCCTGCGC GACCGCTACG AGGCGCACCA CGGCGTGAAG
TTCACCGACG AGGCGCTCGC GGCGGCGGCG CTGATGTCGG ACCGCTACAT TTCCGACCGC
TTCCTGCCGG ACAAGGCGAT CGACCTGATC GACCAGGCCG GCGCGCGCAT CCGGCTGCGC
AACCTGGGCA AGTCCACCGA GGCCATCGAG CGCGAGGACA AGCTGGCCAA GCTCACCCGC
GAGCGCGACG AGGCGGTGTC CGCGGAGAAC TACGACCGCG CCAAGGATCT CAAGGCGCGG
ATCGAGGAAC TGAACGACGA GGTCGCCACC ATCGAGGAAC GCCGCGAGGG CACGCTGAAG
GTGACCGAGA AGGACATCGC CGAAGTCGTC TCCCGCCGCA CCGGCATCCC GGTCGCGCAG
CTGAACGAGG ACGAGCGCAC CCGCCTGCTG AAGCTGGAGG ACGCCCTGCA CGACCGCGTG
GTCGGGCAGG AGGAGGCGGT CACCGCGATC GCCGAGGCGG TCCGCCGCTC GCGCGCCGGC
ATGGGCGACC CGAACCGCCC GACCGGCTCG TTCCTGTTCC TCGGACCCAC CGGCGTGGGC
AAGACCGAAC TCGCCAAGGC CCTCGCCGAG CTGCTGTTCG GCGACGAGGA CCGGCTGATC
CGCTTCGACA TGAGCGAGTT CCAGGAGAAG CACACGGTCT CCCGCCTGCT GGGCTCCCCG
CCCGGATACG TCGGCTACGA GGAGGCCGGC CAGCTCACCG AGCGCGTACG CCGCAAGCCC
TATTCGGTGA TCCTGTTCGA CGAGGTGGAG AAGGCGCACC CGGACATCTT CAACACCCTC
CTCCAGGTCC TCGACGACGG CCGCCTCACC GACGCGCAGG GCCGCACCGT CGACTTCCGC
CACACGGTGG TCATCATGAC CTCCAACATC GGCAGCCAGC TGATCCTCGC GCACATGGGC
GACACCGACG AGATCCGCGA CCAGCTGATG GACCAGGTCC GCAGCTTCTT CCCGCCAGAG
TTCATCAACC GGCTCGACGA AGTGGTGATC TTCCACAGCC TCGGCAAGCC CGAGATGGGC
AACATCGTGG ACCTGATGCT CGACAGCTCC CGCCGCCGCC TCAAGGCGCA GGAACTCGGA
CTGGAGGTCA CCGAGAAGGC GAAGAACTGG CTGGTCGAAC GCGGCTACAA GCCGGAGTTC
GGCGCACGGC CACTACGCCG CACGATCCAA TCCGAGCTGG ACAACAAGGT CGCCACCCTC
CTGCTGTCCG GCGACACACA CCCAGGCGAC ACCATCGTCG CCGACGAGGC CGACGACCAC
CTGGTGTGCA CCGTGAAGCA CGAAGACGAG CCCGTGGGCG CAGGCGCGTC CGGAGCAGCC
GGCTGA
 
Protein sequence
MSSYGGFFDR SDDPFNDLLN RFFGMSPEFS PPRVQRVPIG QLLTDSAREL ISTASQRAGQ 
DGSSDLDTEH LLWAATQVEP TRGILAAANV DPDRLAQTIK KSLPASGSTP SAEPGLTPAA
KRVLMRAHEL SRSSGSTYIG PQHILAALTE DQDSGAGHVL NTTQVDAKDL GKRITKASRA
EGMPTGPEQP SDTPTLDEYG RDMTEDAKAG KLDPVVGRAD EIEQTVEVLS RRTKNNPVLI
GDPGVGKTAI VEGLAQRIVS GDVPTTLEGK RVVMLDLAAL VAGSKYRGEF EERLKNVIDE
VGKAADSTIL FIDELHTVVG AGSGGEGSMD AGNIMKPALS RGELNVIGAT TIDEYRKNIE
KDAALERRFQ PVLIAEPTVE ETIEILEGLR DRYEAHHGVK FTDEALAAAA LMSDRYISDR
FLPDKAIDLI DQAGARIRLR NLGKSTEAIE REDKLAKLTR ERDEAVSAEN YDRAKDLKAR
IEELNDEVAT IEERREGTLK VTEKDIAEVV SRRTGIPVAQ LNEDERTRLL KLEDALHDRV
VGQEEAVTAI AEAVRRSRAG MGDPNRPTGS FLFLGPTGVG KTELAKALAE LLFGDEDRLI
RFDMSEFQEK HTVSRLLGSP PGYVGYEEAG QLTERVRRKP YSVILFDEVE KAHPDIFNTL
LQVLDDGRLT DAQGRTVDFR HTVVIMTSNI GSQLILAHMG DTDEIRDQLM DQVRSFFPPE
FINRLDEVVI FHSLGKPEMG NIVDLMLDSS RRRLKAQELG LEVTEKAKNW LVERGYKPEF
GARPLRRTIQ SELDNKVATL LLSGDTHPGD TIVADEADDH LVCTVKHEDE PVGAGASGAA
G